Pairwise Alignments

Query, 321 a.a., histidine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 338 a.a., putative Amino acid transporter, periplasmic amino acid-binding protein from Pseudomonas putida KT2440

 Score =  316 bits (809), Expect = 6e-91
 Identities = 159/340 (46%), Positives = 220/340 (64%), Gaps = 21/340 (6%)

Query: 1   MKMHKTLMATLLSAGVLASAGAQAAGWCESGKPVKFAGLNWESGMLLTDILQTVLEKGYD 60
           MK   TL+A LL    LAS  + A+   E   P+ F  + WESG L T+IL+ ++E+GY 
Sbjct: 1   MKSISTLLAGLLLTVGLASTDSAASA--EQPAPIHFGAIGWESGALTTEILRLIVERGYG 58

Query: 61  CKTDSLPGNSITMENALSSNDIQVFAEEWVGRSEVWNKAEKAGKVVGVGAPVVGAIEGWY 120
            +TD+LPG++++ME AL+ ND+QV AEEW GRS  W KAE+AG+V  +G  V  A EGW+
Sbjct: 59  YRTDTLPGSTVSMEVALARNDLQVIAEEWAGRSPAWVKAEQAGQVFALGDTVKNAEEGWW 118

Query: 121 VPRYVIEGDAKRKLEAKAPDLKNIADLAKYASVFKDQEEPSKGRFYNCPAGWTCELDNSE 180
           VP YVIEGDA R L+  AP+L ++ DL +Y  VF D E P KGRF N P+GWT E  NS+
Sbjct: 119 VPAYVIEGDAARNLKPVAPELHSVEDLKRYPQVFSDPESPGKGRFLNSPSGWTSETVNSQ 178

Query: 181 MLKSYGLESTYTNFRPGTGPALDAAVLSSYKRGEPILFYYWSPTPLMGQVDLVKLEEKP- 239
            LK+YGL+  Y NFR G+G A+DA + S+ +RG+P+LFYYW+PTPLMG+  L++LEE P 
Sbjct: 179 KLKAYGLDGLYNNFRSGSGAAMDAEIGSAIRRGKPVLFYYWNPTPLMGRYKLIRLEEPPF 238

Query: 240 ------------------GVDKSVSIKVGLSKTFHEQAPELVAVLEKVNLPIDLLNQNLG 281
                                    + +G+SK F E  P+LV+V E+V+LPID LN+ L 
Sbjct: 239 DAQAWATLTDPANPNPKGSRSLPAKLSIGVSKAFRENYPDLVSVFEQVDLPIDRLNKALA 298

Query: 282 RMAKERIESPKLAKIFLKEHPEVWHAWVSDDAAKKIDAAL 321
            M+++R    + A  FL+++ EVW AW+  D A K++A+L
Sbjct: 299 VMSEKRTPPREAALTFLRDNREVWKAWLPADIAAKVEASL 338