Pairwise Alignments

Query, 321 a.a., histidine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 287 a.a., choline / betaine / carnitine ABC transporter - substrate binding protein BetX from Pseudomonas putida KT2440

 Score = 49.7 bits (117), Expect = 8e-11
 Identities = 74/300 (24%), Positives = 116/300 (38%), Gaps = 35/300 (11%)

Query: 13  SAGVLASAGAQAAGWCESGKPVKFAGLN-WESGMLLTDILQTVLEK--GYDCKTDSLPGN 69
           +A V+A + AQA       K V    ++ W   +  T++   V+++  GYD K  ++   
Sbjct: 16  TALVMAMSAAQAMA-----KEVSIGYVDGWADSVATTNVAAEVIKQKLGYDVKLQAVATG 70

Query: 70  SITMENALSSNDIQVFAEEWVGRSEVWNKAEKAGKVVGVGAPVVGAIEGWYVPRYVIEGD 129
            +    A    D  + A   V   E W  A+    VV  G     A  G  VP YV    
Sbjct: 71  IMWQGVATGKLDAMLSAWLPVTHGEYW--AKNKDNVVDYGPNFKDAKIGLIVPEYV---- 124

Query: 130 AKRKLEAKAPDLKNIADLAKYASVFKDQEEPSKGRFYNCPAGWTCELDNSEMLKSYGLES 189
                        +IADL K  + FKD       R     AG    L   + +K YGL S
Sbjct: 125 ----------KAVSIADL-KTDNSFKD-------RIVGIDAGSGVMLKTDQAIKDYGLTS 166

Query: 190 TYTNFRPGTGPALDAAVLSSYKRGEPILFYYWSPTPLMGQVDLVKLEEKPGVDKSVSIKV 249
                +  +G A+ A +  +Y + + I    W P  +  +  L  LE+  GV  +     
Sbjct: 167 Y--KLQASSGAAMTAELGRAYAKQQSIAVTGWVPHWMFAKWKLKFLEDPKGVYGAAETVN 224

Query: 250 GL-SKTFHEQAPELVAVLEKVNLPIDLLNQNLGRMAKERIESPKLAKIFLKEHPEVWHAW 308
            + SK    +APE+   L+K N         +    +E  +    AK ++ +HP+    W
Sbjct: 225 SIGSKELATKAPEVAEFLKKFNWQSKDEIGEVMLAIQEGAKPEAAAKDWVAKHPDRVKEW 284