Pairwise Alignments

Query, 321 a.a., histidine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 307 a.a., putative choline betaine-binding protein from Pseudomonas putida KT2440

 Score = 50.1 bits (118), Expect = 7e-11
 Identities = 72/325 (22%), Positives = 118/325 (36%), Gaps = 31/325 (9%)

Query: 3   MHKTLMATLLSAGVLASAGAQAAGWCESGKPVKFAGLNWESGMLLTDILQTVLEK-GYDC 61
           MHK   A    A  L++  A AA        VK A   W        + + +LE  GY  
Sbjct: 1   MHKFSAAVFALA--LSATTAHAADSDAQCSTVKMADPGWSDIASTNAVARLLLESLGYQV 58

Query: 62  KTDSLPGNSITMENALSSNDIQVFAEEWVGRSEVWN-KAEKAGKVVGVGAPVVGAIEGWY 120
           K DSL    I     L    +  F   W+   + ++ K    G V  +   + G      
Sbjct: 59  KIDSLAVPIIY--GGLKDGQVDAFLGNWMPAQQGFHDKFIANGDVQQLSRNLEGTEFTLA 116

Query: 121 VPRYVIEGDAKRKLEAKAPDLKNIADLAKYASVFKDQEEPSKGRFYNCPAGWTCELDNSE 180
           VP YV               +K+ ADL K+A  F         + Y   +G    L    
Sbjct: 117 VPDYVWNAG-----------VKDFADLQKHAGQFDK-------KLYGIGSGAPANLSLKA 158

Query: 181 MLKSYGLESTYTNFRPGTGPALDAAVLSSYKRGEPILFYYWSPTPLMGQVDLVKLEEKPG 240
           ++               +  A+ A V  + K+ + I F  W+P P+  ++   K+    G
Sbjct: 159 IIDKNEFNLGQWKLVESSEQAMLAQVDRAVKKQQFITFLGWTPHPMNVKL---KMHYLTG 215

Query: 241 VDKSVSIKVGL----SKTFHEQAPELVAVLEKVNLPIDLLNQNLGRMAKERIESPKLAKI 296
            +K    K  +     K + +  P    +L  +   +D+ N  +  +  ++I   + AK 
Sbjct: 216 GEKWFGSKGEVYTLTRKGYPQACPNAAKLLGNLKFTLDMENSIMAEVVDKKISFDEAAKA 275

Query: 297 FLKEHPEVWHAWVSDDAAKKIDAAL 321
           ++K HPE    W++    K    AL
Sbjct: 276 WVKAHPERLDGWLAGVTTKADGDAL 300