Pairwise Alignments

Query, 426 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 426 a.a., D-glucuronate / D-galacturonate TRAP transporter, large permease component (from data) from Pseudomonas putida KT2440

 Score =  754 bits (1946), Expect = 0.0
 Identities = 384/426 (90%), Positives = 410/426 (96%)

Query: 1   MDALILLGSFIALILIGMPVAYALGLSALIGAWWIDIPFQALMIQVAGGVNKFSLMAIPF 60
           M+A ILLGSFI LILIGMPVAYALGLSALIGAWWIDIP QA+MIQVA GVNKFSL+AIPF
Sbjct: 1   MEAFILLGSFIVLILIGMPVAYALGLSALIGAWWIDIPLQAMMIQVASGVNKFSLLAIPF 60

Query: 61  FVLAGAIMAEGGMSRRLVAFAGVLVGFVRGGLSLVNIMASTFFGAISGSSVADTASVGSV 120
           FVLAGAIMAEGGMSRRLVAFAGVLVGFVRGGLSLVNIMASTFFGAISGSSVADTASVGSV
Sbjct: 61  FVLAGAIMAEGGMSRRLVAFAGVLVGFVRGGLSLVNIMASTFFGAISGSSVADTASVGSV 120

Query: 121 LIPEMERRGYPREFATAVTVSGSVQALLTPPSHNSVLYSLAAGGSVSIASLFMAGVVPGL 180
           LIPEMER+GYPREF+TAVTVSGSVQALLTPPSHNSVLYSLAAGG+VSIASLFMAG++PGL
Sbjct: 121 LIPEMERKGYPREFSTAVTVSGSVQALLTPPSHNSVLYSLAAGGTVSIASLFMAGIMPGL 180

Query: 181 LMSACLMVLCLIFAKKRNYPKGEVIPLKQALKICADALWGLMAMVIILGGILSGIFTATE 240
           L+SA +M LCLIFAKKRNYPKGEVIPL++ALKI  +ALWGLMAMVIILGGILSG+FTATE
Sbjct: 181 LLSAVMMGLCLIFAKKRNYPKGEVIPLREALKIAGEALWGLMAMVIILGGILSGVFTATE 240

Query: 241 SAAIAVLWAFFVTMFIYRDYKWSELPKLMHRTVRTISIVMILIAFAASFGYIMTLMQIPA 300
           SAA+AV+W+FFVTMFIYRDYKW +LPKLMHRTVRTISIVMILI FAASFGY+MTLMQIP+
Sbjct: 241 SAAVAVVWSFFVTMFIYRDYKWRDLPKLMHRTVRTISIVMILIGFAASFGYVMTLMQIPS 300

Query: 301 KITTLFLTLSDNRYVILMCINAMLLLLGTVMDMAPLILILTPILLPVVLGIGVDPVHFGM 360
           KITT FLTLSDNRYVILMCIN ML+LLGTVMDMAPLILILTPILLPV+ GIGVDPVHFGM
Sbjct: 301 KITTAFLTLSDNRYVILMCINFMLMLLGTVMDMAPLILILTPILLPVITGIGVDPVHFGM 360

Query: 361 IMLVNLGIGLITPPVGAVLFVGAAVGKVSIEKTVKALLPFYGVLFLVLMAVTYIPALSLW 420
           IMLVNLGIGLITPPVGAVLFVG+A+GKVSIE TVKAL+PFY  LFLVLMAVTYIPA+SLW
Sbjct: 361 IMLVNLGIGLITPPVGAVLFVGSAIGKVSIESTVKALMPFYLALFLVLMAVTYIPAISLW 420

Query: 421 LPSVVL 426
           LPSVVL
Sbjct: 421 LPSVVL 426