Pairwise Alignments

Query, 420 a.a., porin from Pseudomonas simiae WCS417

Subject, 430 a.a., porin-like protein from Pseudomonas putida KT2440

 Score =  366 bits (940), Expect = e-106
 Identities = 196/428 (45%), Positives = 266/428 (62%), Gaps = 18/428 (4%)

Query: 2   SQFARNSSSCIGLLGLGSLAFTLPLSVQADGFIEDAKATLNLRNAYFNRNFTN--PTNPQ 59
           S  AR +  CI      + A     + +  GFIE A+ATL  RN +F+R++ +    + Q
Sbjct: 10  SSSARLAGGCI------AAALCAEATAEEAGFIEGARATLQARNYFFSRDYADIKGASTQ 63

Query: 60  GKAEEWTQNFILDAKSGYTTGTVGFGIDVLGLYSQKLDGGKGTGGTQLLPIHSDGRPADN 119
            + +EW Q FIL+A SGYT GT+G G+DV GL   KLD       + LLP    G+ AD 
Sbjct: 64  SRTQEWAQGFILNASSGYTQGTLGVGVDVTGLLGFKLDSSPEHARSGLLPSLDSGKSADE 123

Query: 120 FGRLGVALKTKLSKTELKVGEWMPVLPILRSDDGRSLPQTFRGGQVTSNEIAGLTLYGGQ 179
           + RLG A+K K+S+TELKVGE MP LP+L   D R LP T++G  + S E AGLTL  GQ
Sbjct: 124 YSRLGAAIKFKVSQTELKVGELMPNLPVLLFSDLRLLPPTYQGAMLESREFAGLTLSAGQ 183

Query: 180 FRGNSPRNDASMEDMF--MNGK------AAFTSDRFNFGGGEYSFNDKRTQVGVWYAELS 231
           FR  S R+ ++ + M+  +N        A FTSDRFN+ G +Y+FND RT VGVW A+L 
Sbjct: 184 FRSTSLRDSSNSQKMYALVNDPINPARLARFTSDRFNYVGADYAFNDNRTSVGVWQAQLE 243

Query: 232 DIYQQQYFNLTHSQPVGDWTLGANLGFFTGKEDGSALAGDLDNKTAFALLSAKYNGNTFY 291
           DIYQQ++++  H++P+G WTLG N G+F  +EDGS +AGD DN   F+L SAK  G+TFY
Sbjct: 244 DIYQQRFYSFKHAEPLGSWTLGVNAGYFDAREDGSKVAGDYDNHALFSLFSAKTGGHTFY 303

Query: 292 VGLQKLTGDSVWMRVNGTSGGTLANDSYNASYDNAKEKSWQVRHDFNFVVLGIPGLTLMN 351
           VG Q++ GD  +++V G +   + N      +    E+SWQVRHD+NFV LG+PGLT   
Sbjct: 304 VGYQQIGGDDGFIQV-GANTNPMGNTLPTYEFSAPGERSWQVRHDYNFVALGLPGLTSTL 362

Query: 352 RYISGSNVHTGAITDGKEWGRESELAYTVQSGALKDLNVRWRNSTMRRDFSNNEFDENRL 411
           RY+ G +V TG   +G++  R+ +LAY VQSG L  L +R RN  M R     + DENRL
Sbjct: 363 RYVKGRDVETGLGFEGRDRERDLDLAYVVQSGPLAGLGIRVRN-VMARSNYRTDIDENRL 421

Query: 412 FISYPISL 419
            +SY I +
Sbjct: 422 ILSYTIKV 429