Pairwise Alignments

Query, 420 a.a., porin from Pseudomonas simiae WCS417

Subject, 416 a.a., porin-like protein from Pseudomonas putida KT2440

 Score =  355 bits (912), Expect = e-102
 Identities = 188/417 (45%), Positives = 257/417 (61%), Gaps = 15/417 (3%)

Query: 7   NSSSCIGLLGLGSLAFTLPLSVQADGFIEDAKATLNLRNAYFNRNFTN--PTNPQGKAEE 64
           N + C+ L   G    + PL     GF ED+KATL+ RN YF+R+F++    N Q KAEE
Sbjct: 2   NHTPCVAL---GLTLLSQPLLAAEGGFFEDSKATLSARNYYFSRDFSDIVGANKQSKAEE 58

Query: 65  WTQNFILDAKSGYTTGTVGFGIDVLGLYSQKLDGGKGTGGTQLLPIHSDGRPADNFGRLG 124
           W Q FILD KSGYT G VGFG+D LGL   KLD       T LLP+H DGR AD + RL 
Sbjct: 59  WAQGFILDFKSGYTPGPVGFGVDALGLLGIKLDSSPDRTNTGLLPVHGDGRAADEYSRLA 118

Query: 125 VALKTKLSKTELKVGEWMPVLPILRSDDGRSLPQTFRGGQVTSNEIAGLTLYGGQFRGNS 184
              K +LSKTEL+ GE  P LP+L   D R LP T++G  ++S+EI GLT+  G  +   
Sbjct: 119 PTFKARLSKTELRAGELQPNLPVLTFSDIRLLPPTYQGVSLSSSEIDGLTMQAGHLKSTH 178

Query: 185 PRNDASMEDMFMNGKAAFT------SDRFNFGGGEYSFNDKRTQVGVWYAELSDIYQQQY 238
            RN+    D  MN            SD FN+ GG+Y+FN  ++ V +WY +L DIYQQ +
Sbjct: 179 LRNEGG--DGKMNAMLGHVPMRQAESDAFNYVGGDYAFNANQSSVSLWYGQLEDIYQQGF 236

Query: 239 FNLTHSQPVGDWTLGANLGFFTGKEDGSALAGDLDNKTAFALLSAKYNGNTFYVGLQKLT 298
             L HS+PVGDW L ANLG+FT +E G AL G++DN+  F+L +A++ G++F+ G Q + 
Sbjct: 237 VGLKHSKPVGDWVLSANLGYFTAREQGDALLGNIDNQAFFSLFTARHGGHSFHAGYQGIY 296

Query: 299 GDSVWMRVNGTSGGTLANDSYNASYDNAKEKSWQVRHDFNFVVLGIPGLTLMNRYISGSN 358
           GDS + RV       L N+     +    E+S+QVR+D+NF  +G+PGLT   RYI+G+N
Sbjct: 297 GDSPFPRVFANI-SPLGNEVPTYEFAYTDERSYQVRYDYNFAAMGVPGLTATVRYITGNN 355

Query: 359 VHTGAITDGKEWGRESELAYTVQSGALKDLNVRWRNSTMRRDFSNNEFDENRLFISY 415
           V TG   +G++  R+ ++ Y VQSGALK L +R RN+  R ++  ++ DENRL + Y
Sbjct: 356 VDTGLGYEGRDRERDLDIGYAVQSGALKGLGIRVRNAMARSNY-RSDIDENRLTLVY 411