Pairwise Alignments

Query, 420 a.a., porin from Pseudomonas simiae WCS417

Subject, 417 a.a., putative Porin from Pseudomonas putida KT2440

 Score =  285 bits (730), Expect = 1e-81
 Identities = 158/428 (36%), Positives = 238/428 (55%), Gaps = 21/428 (4%)

Query: 1   MSQFARNSSSCIGLLGLGSLAFTLPLSVQADGFIEDAKATLNLRNAYFNRNFTNPTNPQG 60
           MS+F    ++C      G L   LP++  A GFIED+K  L LRN YFN NF +      
Sbjct: 1   MSRFLFRGATC------GLLCGWLPVAGAA-GFIEDSKLKLQLRNVYFNENFRDEQGMSA 53

Query: 61  KAE--------EWTQNFILDAKSGYTTGTVGFGIDVLGLYSQKLDGGKGTGGTQLLPIHS 112
           +A         EW Q F+LD +SG+T GT+G G+D +GL   +LD G+G  GT LLP+H 
Sbjct: 54  RAAATAKSERVEWAQGFLLDYQSGFTQGTLGLGVDAMGLLGVRLDSGRGRSGTGLLPVHD 113

Query: 113 DGRPADNFGRLGVALKTKLSKTELKVGEWMPVLPILRSDDGRSLPQTFRGGQVTSNEIAG 172
           DGR AD F   G+  K +L  T +K G  +P  P+L  +D R LPQT++G Q+TS +I  
Sbjct: 114 DGRAADEFASAGITAKARLGSTVVKHGTLLPKTPVLVYNDARLLPQTYQGTQLTSTDIDN 173

Query: 173 LTLYGGQFRGNSPRNDASMEDMFMNGKAAFTSDRFNFGGGEYSFNDKRTQVGVWYAELSD 232
           LTL  G       R+ +    ++++G     S  F+F G +Y+ + K+ ++  ++ EL  
Sbjct: 174 LTLTAGHLDRFKQRDSSDSTGLYLDGYGGPASGDFSFAGADYAVS-KQLRLSYFHGELEH 232

Query: 233 IYQQQYFNLTHSQPVGDWTLGANLGFFTGKEDGSALAGDLDNKTAFALLSAKYNGNTFYV 292
            Y+Q +  L H  P+G   L  +L +F  ++ G+A  G +DN      LS  ++G+T   
Sbjct: 233 FYRQDFAGLVHDLPLGGGVLTTDLRYFKSRDSGTAYGGGIDNDMFSGQLSYAHSGHTVGA 292

Query: 293 GLQKLTGDSVWMRVNGTSGGTLANDSYNASYDNAKEKSWQVRHDFNFVVLGIPGLTLMNR 352
           G Q L G++    ++G +  + +N      +   +EK+W   + +NF   G+PGLT M R
Sbjct: 293 GYQVLDGEAGLPYISGATVYSFSNVGI-GKFIEEEEKTWMASYAYNFAAAGVPGLTFMTR 351

Query: 353 YISGSNVHTGAITDG-KEWGRESELAYTVQSGALKDLNVRWRNSTMRRDFSNNEFDENRL 411
           Y+SG N  +G   +G KEW R++E+AY VQ G LK L V+ RN   R DF+    D NRL
Sbjct: 352 YLSGDNGRSGG--EGIKEWERDAEIAYVVQGGPLKGLGVKLRNYVYRSDFARGR-DSNRL 408

Query: 412 FISYPISL 419
           +++Y I++
Sbjct: 409 YLTYDIAI 416