Pairwise Alignments

Query, 420 a.a., porin from Pseudomonas simiae WCS417

Subject, 429 a.a., tricarboxylate-specific outer membrane porin from Pseudomonas putida KT2440

 Score =  329 bits (843), Expect = 1e-94
 Identities = 182/407 (44%), Positives = 248/407 (60%), Gaps = 11/407 (2%)

Query: 19  SLAFTLPLSVQADGFIEDAKATLNLRNAYFNRNFTNPTNPQ-GKAEEWTQNFILDAKSGY 77
           +LA   P+S  A  F ED+ AT   RN YFNR+F + T+ Q  K +EW Q FIL+ +SGY
Sbjct: 27  ALAGVAPMSQAA--FFEDSTATFETRNMYFNRDFRDGTSAQQSKRDEWAQGFILNFESGY 84

Query: 78  TTGTVGFGIDVLGLYSQKLDGGKGTGGTQLLPIHSDGRPADNFGRLGVALKTKLSKTELK 137
           T GTVGFG+D LG+   KLD       + LLP H DG+ AD + +LG+  K K+S+TELK
Sbjct: 85  TDGTVGFGLDALGMLGIKLDSSPDRTDSGLLPTHDDGKAADEYSKLGLTGKVKISQTELK 144

Query: 138 VGEWMPVLPILRSDDGRSLPQTFRGGQVTSNEIAGLTLYGGQFRGNSPRNDASMEDMFMN 197
           +G  +P LP L+ +DGR LPQTF GG +TS EI GLT  GG+      RND + ED+ +N
Sbjct: 145 IGTLIPELPTLQPNDGRILPQTFEGGLLTSKEIKGLTFTGGRIDKAKDRNDTNWEDLALN 204

Query: 198 GK-----AAFTSDRFNFGGGEYSFNDKRTQVGVWYAELSDIYQQQYFNLTHSQPVGDWTL 252
            K       F++D    GG +Y F D+ T     +A+L DIY+Q +  +  +QP G  TL
Sbjct: 205 NKNGRFGGTFSADNLALGGLDYQFTDRITG-SYHFAQLDDIYRQHFIGMVATQPWGPGTL 263

Query: 253 GANLGFFTGKEDGSALAGDLDNKTAFALLSAKYNGNTFYVGLQKLTGDSVWMRVNGTSGG 312
           GA+L      + G+A AG++DN T   +LS    G+      Q+L+G+S +  V+G +  
Sbjct: 264 GADLRLAMSDDAGAAKAGNIDNTTVNGMLSYALGGHKVSAAWQQLSGESAFPYVDG-ADP 322

Query: 313 TLANDSYNASYDNAKEKSWQVRHDFNFVVLGIPGLTLMNRYISGSNVHTGAITDGKEWGR 372
            L N      +  A E+SWQ R+D+NF  LG+PGLT M RYISG NV   A  +GKEW R
Sbjct: 323 YLVNFVQINDFAGADERSWQARYDYNFAALGVPGLTFMTRYISGDNVSRAAGGEGKEWER 382

Query: 373 ESELAYTVQSGALKDLNVRWRNSTMRRDFSNNEFDENRLFISYPISL 419
            +EL Y VQSG LK++ VR RN+T R +F+  + DE RL +SY ++L
Sbjct: 383 NTELKYVVQSGPLKNVAVRLRNATFRSNFA-RDADEVRLLVSYSVAL 428