Pairwise Alignments

Query, 485 a.a., sulfonate ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 499 a.a., Transporter, NCS1 nucleoside transporter family from Pseudomonas putida KT2440

 Score = 97.8 bits (242), Expect = 7e-25
 Identities = 114/476 (23%), Positives = 204/476 (42%), Gaps = 55/476 (11%)

Query: 14  IERRSIDYIPEAERHGRLFSQFTLWMGANLQITAIVTGALAVVLGGDVFWSLIGLLVGQL 73
           IE   ++ IP  +R       F L  G        V G+  V+ G      +  +L+G  
Sbjct: 7   IETNGVEQIPADQRDASPLDLFRLIFGGANTFATAVLGSFPVLFGLSFQAGVWAILLGVG 66

Query: 74  IGGGVMALHAAQGPKLGLPQMISSRVQFGVYGAAIPIVLVCLMYLGFTATGTVLSGQAL- 132
           IG  ++A     G   G    +SS   FGV+G  +   L  L  + F +     SG AL 
Sbjct: 67  IGALILAPMGLFGALNGTNNAVSSGAHFGVHGRIVGSFLSLLTAVAFFSLSVWSSGDALV 126

Query: 133 ---GQLFGVSD---SVGIL--IFASVIVLVTVLGYRVIHFIGRVA-------SVIGVIAF 177
               +L G+ +   ++G+   +FA ++++V + G+R + ++ ++A        ++G++AF
Sbjct: 127 GGAKRLAGLPETDLTLGLAYGLFAVLVLVVCIFGFRFMLWVNKIAVWASSLLFLLGIVAF 186

Query: 178 VYLFSRLMSQTDVGALLQIRHFSWSSFLLAVSLAASWQIAFGPYVADYSRYLPSNTSSLK 237
              F    +    G++   +   W++F+ A  LA S  ++FG ++ D+SRY+P  T   +
Sbjct: 187 AGPFDAGYA----GSVNLGQAGFWAAFVGAAILAMSNPVSFGAFLGDWSRYIPRETPKAR 242

Query: 238 TFLAAGAGSVIGAQ----VAMILGVFAAAMSNGQFAGHEVA--YIVGLSGTGATAALLYF 291
             LA     VI AQ    +  + G+  A +   Q   +  A  Y+ GL     +   L  
Sbjct: 243 IMLA-----VIAAQGATLIPFLFGLCTATLVATQAPDYIAANNYVGGLLAVAPSWFFLPV 297

Query: 292 SI--AFGKVTISTLNSYGSFMCIATIISGFRGRLEVTRLQRLVFVLAIVGTATLIALLGQ 349
            +    G ++  T   YG+ + ++++      R   T    L+ VLAI         +G+
Sbjct: 298 CLIAVIGGMSTGTTALYGTGLDMSSVFPRLLSRAGAT---LLIGVLAIG-----FIFIGR 349

Query: 350 HSF--LGAFKSFILFLLAFFTPWSAINLVDYYCITRERY------DVPALADPNGRY--- 398
            +F  + +  +F + ++   +PW  I ++    ITR  +       V       G Y   
Sbjct: 350 FTFNLVQSVSTFAVLIITCTSPWMVIMILG--LITRRGFYHADDLQVFTRGQRGGHYWFL 407

Query: 399 GRWNLLGISVYVFGVLVQLPFISTK-FYTGPLVAALGDVDISWIIGLVLPAALYYL 453
             WN  G+  ++    V L F++    + GPL    G +D+S  + L L   LY L
Sbjct: 408 HGWNWRGMGAWIPSAAVGLCFVNLPGQFVGPLGDLAGGIDLSLPVTLGLAGVLYLL 463