Pairwise Alignments

Query, 472 a.a., RND transporter from Pseudomonas simiae WCS417

Subject, 497 a.a., Outer membrane factor (OMF) lipoprotein associated wth MdtABC efflux system from Variovorax sp. SCN45

 Score =  317 bits (813), Expect = 4e-91
 Identities = 192/487 (39%), Positives = 274/487 (56%), Gaps = 25/487 (5%)

Query: 3   PRLKPLAALMLLALQGCSMAPTYQVPAVDLPAGYREQTSDGPWHSAQPSDQLAPE-WWTL 61
           P  +   AL +L L GC++ P Y  P +++PA ++E  + GPW +A P    A   WW  
Sbjct: 8   PLSRAALALAVLLLAGCAVGPDYVRPQMEVPAAFKE--TGGPWKTAAPQTIDADHPWWDA 65

Query: 62  YNDSRLNDLQQQLLKANPDLAAALAHFDASQAYASQLHAGLFPQISASAQPLRQRQSDSR 121
           Y DS L DL  +   AN ++  A A +  +QA  +   A  FP +  +A  +R + + + 
Sbjct: 66  YGDSTLGDLMAKANAANQNIRVAEAQYRQAQAITAAARANFFPTVGVNAGAVRGQSNSTG 125

Query: 122 PLRGDTQPSVYNSNTAGFSLSYDLDLWGKIRNQVAAGDAQAQASGDDLAVARLSLQHQLA 181
            ++  T      ++T G S S++ DLWG +R  V AG A  QAS DDLA ARLS+Q  LA
Sbjct: 126 TVKLGT------TDTLGLSASWEPDLWGAVRRSVEAGTASEQASADDLAGARLSIQTTLA 179

Query: 182 TLYVQLNGLDAQARILDRSLDDFRQALQLTRSRYEGKIASELDLTRAQNQLAEAKAQWDE 241
             Y+Q+  +D +  +   +   + +AL+LT+ +Y        D+  A++QL  A+AQ  +
Sbjct: 180 QDYLQIRVIDLERDLYASTTTAYAKALELTQHQYAAGTVLRSDVALAESQLKTAQAQAVD 239

Query: 242 IRGQRNLTEHAIGELVGVAASDFSLSP--------SPQLISL--------PGIPSQLPSH 285
           +  QR   EHAI  L G A + FSL P        +P+ +SL        P  P+ LPS 
Sbjct: 240 LDAQRAQLEHAIAVLTGQAPASFSLPPLESSGQPQTPESLSLASALHVQLPVSPAGLPSE 299

Query: 286 LLQRRPDIAAAERRVFAANANIGVAKAAWYPDFSLTGLIGGQTQGVGNLLSAGNRYWALG 345
           LL+RRPDIA AERRV AANANIGVAKAA+YP   L+   G     +  L +  +R W+LG
Sbjct: 300 LLERRPDIAGAERRVQAANANIGVAKAAYYPQIMLSASGGFSAASLATLFNTPSRVWSLG 359

Query: 346 PLVNLPIFDGGRLSANERQAKAEFEEASAHYRSQVLKAVREVEDNLAQLRDLQQEAQDEQ 405
             +   +FDGG   A+  QA A ++ + A Y+  VL   ++VEDNLA LR L  E+  + 
Sbjct: 360 AALAQTVFDGGLRKAHTDQAVAAYDASVAQYKQTVLGGFQQVEDNLATLRVLDGESTLQA 419

Query: 406 AAADAAQHTQSLAMNSYQAGAVSYLDVVTAQTAALQAQRTLQAVQTRQLQASVGLVTALG 465
            A  A+Q  + LA+  Y+AG  +YL VVTAQT +L  QRT   V  RQL ASV L++A G
Sbjct: 420 DAVRASQLAERLALAQYRAGTATYLSVVTAQTLSLTNQRTAAQVLGRQLAASVSLISATG 479

Query: 466 GGWHASN 472
           GGW+A++
Sbjct: 480 GGWNAAD 486