Pairwise Alignments

Query, 389 a.a., RND transporter MFP subunit from Pseudomonas simiae WCS417

Subject, 376 a.a., RND transporter from Pseudomonas simiae WCS417

 Score =  102 bits (253), Expect = 2e-26
 Identities = 93/385 (24%), Positives = 166/385 (43%), Gaps = 36/385 (9%)

Query: 10  KRLMLMGVGGLTLAALLVANGLHARTLHEQSVTAWTETAAIPQVRVFQPQQNAAGDTLRL 69
           +R ML+ +G + L  LL+A G  A ++++Q +  +++      V V    +      +  
Sbjct: 3   RRRMLIMLGVVLLIVLLLA-GYKAFSIYQQ-IQVFSKPKPAVSVAVATATEQPWQLRVSS 60

Query: 70  PAHLEAWSKAPIHARVSGYLKDWKADIGTQVKAGQILAEIDSPDLDQQMAQTHARLIQEQ 129
              L+A     +   ++G +KD + + G +VK GQ L ++DS       A   A L   Q
Sbjct: 61  VGTLKALQGVNLSLEIAGTVKDVQFESGQKVKTGQPLVQLDS-------AVESALLETAQ 113

Query: 130 ANARLAQTTATRWQNLLASHSVSRQEADEKTSNAAAAKANAEAAAADYARLSALESYKTI 189
           A+  LAQ    R   L+ S ++S+ E D  ++     KA      A  A+       K I
Sbjct: 114 ADLGLAQLDYGRGSQLVGSQAISKGEFDRLSAQLQKNKATVNQLKASLAK-------KHI 166

Query: 190 RAPFAGTITARNTDIGQLIKADTDSDPELFNIADTHQLRLYVPVPQNYAAVIHPGLEAEL 249
            APF GTI  R  D+G  + + T     +  + D   L +   +P++    + PG   ++
Sbjct: 167 VAPFGGTIGIRQVDVGDYLASGT----VIATLQDLSSLYVDFYIPEHAVPKVAPGQPVQV 222

Query: 250 TVPEHPGEHFKARLIGDSTAIDRRSGTLLAQFVADNPNGELLPGDYAEATLPIPADTHGV 309
            V  +PGE F   +   +  ++  +  +L +    NP G+LLPG +    + +P     +
Sbjct: 223 EVSAYPGEQFPGSISAINPKVENSTRNVLVRATLANPEGKLLPGMFTRLDVLLPNPAPQI 282

Query: 310 SIPASALIFRAQGTQVAVL------------DAHNHVHLQTIHIGLDLGER----LVIDQ 353
            +P  A+ +   G  V  +            DA     L      ++ GER    +++ +
Sbjct: 283 VVPEGAITYTLYGNSVYAVAEKKTEGGEVEKDADGKPLLIAERRFVETGERRGGLVLVSK 342

Query: 354 GLKPVDRVVDNPPDALREGDPVQLA 378
           GLK  ++VV      L  G P+ ++
Sbjct: 343 GLKAGEQVVSAGQLKLDNGTPIAIS 367