Pairwise Alignments

Query, 389 a.a., RND transporter MFP subunit from Pseudomonas simiae WCS417

Subject, 433 a.a., secretion protein HlyD from Pseudomonas simiae WCS417

 Score =  110 bits (274), Expect = 1e-28
 Identities = 86/309 (27%), Positives = 142/309 (45%), Gaps = 12/309 (3%)

Query: 81  IHARVSGYLKDWKADIGTQVKAGQILAEIDSPDLDQQMAQTHARLIQEQANARLAQTTAT 140
           + +RV G L     + G  VKAG +LAEID       + Q    L+Q QA  + AQ    
Sbjct: 96  VRSRVGGELVKIAFEEGQMVKAGDLLAEIDPRSYQNALLQAQGTLMQNQAQLKNAQVDVQ 155

Query: 141 RWQNLLASHSVSRQEADEKTSNAAAAKANAEA--AAADYARLSALESYKTIRAPFAGTIT 198
           R+++L A  S+++Q  D   +     +   +    A D A+L+    +  IRAP +G + 
Sbjct: 156 RYRDLYAQDSIAKQTLDTAEALVLQYQGTVKTNQGAVDDAKLNL--EFTKIRAPISGRVG 213

Query: 199 ARNTDIGQLIKADTDSDPELFNIADTHQLRLYVPVPQNYAAVIHPGLEAELTVPEHPGEH 258
            R  D+G L+ A+  +   L  I  T  + +   +P+N    +     A   +P    + 
Sbjct: 214 LRQVDVGNLVAANDTTF--LAVITQTQPISVAFTLPENTLETVLTRYHAGNKLPVEAWDR 271

Query: 259 --FKARLIGDSTAIDRR----SGTLLAQFVADNPNGELLPGDYAEATLPIPADTHGVSIP 312
              K + +G   ++D +    +GTL  +   DN +  L P  +    L      + V  P
Sbjct: 272 GDVKQQAVGVLQSLDNQIDVTTGTLKFKARFDNKDQALFPNQFVNVHLLADTLHNVVLAP 331

Query: 313 ASALIFRAQGTQVAVLDAHNHVHLQTIHIGLDLGERLVIDQGLKPVDRVVDNPPDALREG 372
           ++A+ F   GT V VLD    V +Q + +G   G+  VI +GLK  DRVV    D L++G
Sbjct: 332 SAAIQFGNTGTFVYVLDGDKKVKVQPLVVGDTDGDNTVIKEGLKAGDRVVLEGTDRLKDG 391

Query: 373 DPVQLADAS 381
             +++ + S
Sbjct: 392 SEIEVVNDS 400