Pairwise Alignments

Query, 389 a.a., RND transporter MFP subunit from Pseudomonas simiae WCS417

Subject, 415 a.a., RND efflux system, membrane fusion protein from Variovorax sp. SCN45

 Score =  256 bits (655), Expect = 6e-73
 Identities = 145/370 (39%), Positives = 220/370 (59%), Gaps = 3/370 (0%)

Query: 20  LTLAALLVANGLHARTLHEQSVTAWTETAAIPQVRVFQPQQNAAGDTLRLPAHLEAWSKA 79
           L L  L  A  +  R  + +++ A T   A   V+   P+   AG TL LP  L+ + ++
Sbjct: 41  LVLLGLGAARTVFVRIANARALEAGTTERAKQYVQTALPRTPTAGQTLSLPGTLQGFVQS 100

Query: 80  PIHARVSGYLKDWKADIGTQVKAGQILAEIDSPDLDQQMAQTHARLIQEQANARLAQTTA 139
           PI AR SGYLK W  DIG++V+ G++LAEI++P++DQQ++Q  A   Q  +   LA++TA
Sbjct: 101 PISARASGYLKRWTKDIGSRVEKGELLAEIETPEIDQQLSQAVAARAQAASGLELARSTA 160

Query: 140 TRWQNLLASHSVSRQEADEKTSNAAAAKANAEAAAADYARLSALESYKTIRAPFAGTITA 199
            RW+ L     VS+QE DE+ S  A A +N  AA A+  RL   E +K + APFAG IT 
Sbjct: 161 DRWEALRKKDVVSQQELDERRSAVAQATSNVAAADANVQRLKQTEGFKRVVAPFAGVITR 220

Query: 200 RNTDIGQLIKADT--DSDPELFNIADTHQLRLYVPVPQNYAAVIHPGLEAELTVPEHPGE 257
           RN D+G LI A +   +   LF +A T  LR+Y+ VPQ YA ++  G    +T  E  G+
Sbjct: 221 RNVDVGDLIDAGSGGGAGRALFLLAQTDPLRVYINVPQAYAQLVKAGQPVVVTQAELRGQ 280

Query: 258 HFKARLIGDSTAIDRRSGTLLAQFVADNPNGELLPGDYAEATLPIPADTHGVSIPASALI 317
            FK ++   + +ID  +  +  +    N +G LLPG Y + +LP+ A +  +S+P++AL+
Sbjct: 281 TFKGQVARTAGSIDTTTRMMQVEVSLPNSDGALLPGAYVQVSLPLAA-SRTLSVPSNALL 339

Query: 318 FRAQGTQVAVLDAHNHVHLQTIHIGLDLGERLVIDQGLKPVDRVVDNPPDALREGDPVQL 377
           FRA+GT++AV+D    V+L+ + +G + GE + +  GL+  DR+V NP D+L EGD V +
Sbjct: 340 FRAEGTRIAVVDPQGRVNLRAVTLGRNYGENVEVIDGLEHTDRMVLNPSDSLAEGDVVAV 399

Query: 378 ADASGGAHAP 387
           A  +  A AP
Sbjct: 400 APETPPAKAP 409