Pairwise Alignments

Query, 389 a.a., RND transporter MFP subunit from Pseudomonas simiae WCS417

Subject, 357 a.a., hypothetical protein from Sphingobium sp. HT1-2

 Score =  110 bits (276), Expect = 5e-29
 Identities = 86/316 (27%), Positives = 141/316 (44%), Gaps = 5/316 (1%)

Query: 63  AGDTLRLPAHLEAWSKAPIHARVSGYLKDWKADIGTQVKAGQILAEIDSPDLDQQMAQTH 122
           AG +      + +  ++ I   V+G + + + D+G+ V AGQ L  +D+ D  + +    
Sbjct: 40  AGTSTSYAGEIRSAFESQIGFEVAGRIVERRVDLGSSVHAGQTLLRLDNSDYARALDSAA 99

Query: 123 ARLIQEQANARLAQTTATRWQNLLASHSVSRQEADEKTSNAAAAKANAEAAAADYARLSA 182
           A+    +  A + Q    R + LL    +S  E D++ + A  A+A   AA A     SA
Sbjct: 100 AQSSSARTAAAVQQADLARSRELLKQGFISPAEFDQQKAAAIQAQAQLRAAGAQSGTASA 159

Query: 183 LESYKTIRAPFAGTITARNTDIGQLIKADTDSDPELFNIADTHQLRLYVPVPQNYAAVIH 242
             S   + AP AG +T    ++GQ++ A       +  +AD  +  + V +P+     I 
Sbjct: 160 QLSRTVLTAPRAGVVTQIQGEVGQVVGA----GQTIVTLADPSRPEIAVALPEGSLDRIR 215

Query: 243 PGLEAELTVPEHPGEHFKARLIGDSTAIDRRSGTLLAQFVADNPNGELLPGDYAEATLPI 302
                 ++V   PG  + ARL   S A D  + T  A+   D P   LL G+ AE  +  
Sbjct: 216 SASRLSVSVWSSPGRRYAARLRSISGAADPATRTFAARLSVDAPAQALLMGETAELRVEG 275

Query: 303 PADTHGVSIPASALIFRAQGTQVAVLDAHNH-VHLQTIHIGLDLGERLVIDQGLKPVDRV 361
            A    V +P +A++      Q  VLD     V  + + IG   G+ L I  GLKP + +
Sbjct: 276 AAGDAAVRVPLTAVLQSNGRAQAWVLDRRTMVVQPRAVQIGAAQGDMLTIRSGLKPGETI 335

Query: 362 VDNPPDALREGDPVQL 377
           V      LR G+ V++
Sbjct: 336 VTAGVHLLRAGEKVRI 351