Pairwise Alignments

Query, 389 a.a., RND transporter MFP subunit from Pseudomonas simiae WCS417

Subject, 390 a.a., CzcABC family efflux RND transporter, membrane fusion protein from Sphingobium sp. HT1-2

 Score =  107 bits (267), Expect = 6e-28
 Identities = 94/374 (25%), Positives = 166/374 (44%), Gaps = 9/374 (2%)

Query: 4   DHKPSRKRLMLMGVGGLTLAALLVANGLHARTLHEQSVTAWTETAAIPQVRVFQPQQNAA 63
           D    R+R  L+ +GG+   AL+ A    A ++  +   A       P V V  P Q   
Sbjct: 18  DEDRIRRRRRLLIIGGVVAVALVAAAA--ALSMRGKDAAAPDAAPQAPVVSVLTPGQTMV 75

Query: 64  GDTLRLPAHLEAWSKAPIHA-RVSGYLKDWKADIGTQVKAGQILAEIDSPDLDQQMAQTH 122
             T+     L A    P+      G +       G  V+AGQ+LA ++     +Q+    
Sbjct: 76  ARTVSSTGSLAARVDMPVGVVGEGGMVTRVLVQPGDWVRAGQVLATVERSVQSEQVNSLA 135

Query: 123 ARLIQEQANARLAQTTATRWQNLLASHSVSRQEADEKTSNAAAAKANAEAAAADYARLSA 182
           A++  ++ANA+LAQ    R + L+    +S  + D++T+    A A    A A  A   A
Sbjct: 136 AQVEVQRANAKLAQAQLERAKALVGRGFISAADIDQRTATRDQAVAQVRVAEAQLAEQRA 195

Query: 183 LESYKTIRAPFAGTITARNTDIGQLIKADTDSDPELFNIADTHQLRLYVPVPQNYAAVIH 242
                 IRAP +G +  R  + GQ+++A   +   LF +A   ++ +   V +   A + 
Sbjct: 196 RTGRLDIRAPASGLVLTRTVEPGQIVQAGGGT---LFRMAKDGEMEMQAQVAEADLATLR 252

Query: 243 PGLEAELTVPEHPGEHFKARLIGDSTAIDRRSGTLLAQFVADNPNGELLPGDYAEATLPI 302
            G  A +T P    +HF  R+   S  +D ++   +A+ +A   N  + PG +A AT+  
Sbjct: 253 AGNSATVT-PVGSNQHFSGRVWQVSPVVDPQTRQGIAR-IAVAYNDAIRPGGFASATITS 310

Query: 303 PADTHGVSIPASALIFRAQGTQVAVLDAHNHVHLQTIHIGLDLGERLVIDQGLKPVDRVV 362
            +    + +P SA+   A+G+ V +++  N V  + + +G      + I  G+   +R+V
Sbjct: 311 GSGNTPL-LPESAVQSDAKGSYVYIVNGKNQVERRDVKVGQVSDTGVAITSGITGAERIV 369

Query: 363 DNPPDALREGDPVQ 376
            +    L  G  V+
Sbjct: 370 TSAGAFLTVGQKVK 383