Pairwise Alignments

Query, 389 a.a., RND transporter MFP subunit from Pseudomonas simiae WCS417

Subject, 378 a.a., Multidrug efflux RND membrane fusion protein MexC from Pseudomonas putida KT2440

 Score =  110 bits (275), Expect = 7e-29
 Identities = 105/387 (27%), Positives = 165/387 (42%), Gaps = 26/387 (6%)

Query: 13  MLMGVGGLTLAALLVANGLHA-RTLHEQSVTAWTETAAIP-QVRVFQPQQNAAGDTLRLP 70
           M+   G + + AL +A  L       EQ   A    A+ P ++    P+Q A      LP
Sbjct: 1   MMGKTGSIRVGALAMAIALAGCEPAAEQDGAA---NASYPVEIVTLAPEQVALA--AELP 55

Query: 71  AHLEAWSKAPIHARVSGYLKDWKADIGTQVKAGQILAEIDSPDLDQQMAQTHARLIQEQA 130
             +E    A + ARV G +   + + G  VKAG +L +ID       +A+  A L + QA
Sbjct: 56  GRVEPMRVAEVRARVPGIVLHKRFEEGADVKAGDVLFQIDPAPFKAALARAEADLARAQA 115

Query: 131 NARLAQTTATRWQNLLASHSVSRQEADEKTSNAAAAKANAEAAAADYARLSALESYKTIR 190
             + AQ    R++ L+   +VS+Q+ D  T+   +A A   +A AD         Y T+ 
Sbjct: 116 VQQEAQARVKRYEPLVKIEAVSQQDFDSATAELRSAGAAVRSAQADVQAARLNLGYATVT 175

Query: 191 APFAGTITARNTDIGQLIKADTDSDPELFNIADTHQL-RLYVPVPQNYAAVIH------- 242
           AP +G I       G L+        E   +A   QL  +Y+   Q+ A  +        
Sbjct: 176 APISGRIGRALATEGALV-----GQGEATLMARIQQLDPIYIDFTQSAADALRLRQALKD 230

Query: 243 --PGLEAELTVPEHPGEHFK--ARLIGDSTAIDRRSGTLLAQFVADNPNGELLPGDYAEA 298
                +++    +  G  F+    L+    ++DR +G ++ +   DN +G LLPG Y   
Sbjct: 231 GALSADSQRLTAQVEGTDFQRSGELMFTDVSVDRGTGQVILRGRFDNADGTLLPGMYVRV 290

Query: 299 TLPIPADTHGVSIPASALIFRAQGTQVAVLDAHNHV-HLQTIHIGLDLGERLVIDQGLKP 357
             P   D H + +P  A + R    Q  VL A N +   + +  G+  G R  I +GL+P
Sbjct: 291 RTPQGTDNHAILVPQRA-VQRGSDGQARVLVATNGIAEARAVRTGVMQGSRWQITEGLEP 349

Query: 358 VDRVVDNPPDALREGDPVQLADASGGA 384
            D+V+   P  L  G PV  A     A
Sbjct: 350 GDQVIVGSPAGLAPGMPVAPAQKQTAA 376