Pairwise Alignments

Query, 389 a.a., RND transporter MFP subunit from Pseudomonas simiae WCS417

Subject, 401 a.a., efflux RND transporter periplasmic adaptor subunit from Dickeya dadantii 3937

 Score =  105 bits (262), Expect = 2e-27
 Identities = 87/374 (23%), Positives = 156/374 (41%), Gaps = 12/374 (3%)

Query: 22  LAALLV-ANGLHARTLHEQSVTAWTETAAIPQVRVFQPQQNAAGDTLRLPAHLEAWSKAP 80
           LAA+L+ + GL        +          P+V +   +         LP    A+  A 
Sbjct: 10  LAAMLIFSGGLVLTGCDNNASQEGAHQGGAPEVGIVTIKSQTLNIITELPGRTSAYRIAE 69

Query: 81  IHARVSGYLKDWKADIGTQVKAGQILAEIDSPDLDQQMAQTHARLIQEQANARLAQTTAT 140
           +  +V+G +       G+ VKAG  L +ID      Q     A L+Q QANA +A+ T  
Sbjct: 70  VRPQVNGIILKRNFVEGSDVKAGTSLYQIDPATYQAQYNNAKAALVQAQANAEIARLTVN 129

Query: 141 RWQNLLASHSVSRQEADEKTSNAAAAKANAEAAAADYARLSALESYKTIRAPFAGTITAR 200
           R++ LL ++ VS+Q+ D+  + A   +A+  AA A         +Y  + AP  G +   
Sbjct: 130 RYKPLLGTNYVSKQDYDQAVATARQTEASVAAAKATLDNAQISLNYTRVTAPITGRVGKS 189

Query: 201 NTDIGQLI-KADTDS-------DPELFNIADTHQ--LRLYVPVPQNYAAVIHPGLEAELT 250
               G L+  A T +       DP   ++  +    LRL   +        +     +LT
Sbjct: 190 TVTEGALVSNAQTTALTTIQQLDPIYVDVTQSTNDFLRLKKELENGTLQQTNGKANVQLT 249

Query: 251 VPEHPGEHFKARLIGDSTAIDRRSGTLLAQFVADNPNGELLPGDYAEATLPIPADTHGVS 310
           +      +    L      +D  +G++  + V  NP+  LLPG +  A L      + + 
Sbjct: 250 LDNGTRYNQPGTLEFSDVTVDETTGSITLRAVFPNPDHNLLPGMFVRAQLDSGVTPNAIL 309

Query: 311 IPASALIFRAQG-TQVAVLDAHNHVHLQTIHIGLDLGERLVIDQGLKPVDRVVDNPPDAL 369
           +P   +    +G   V ++   + V + +I  G  +G++ ++  G+KP DR++      +
Sbjct: 310 VPQQGVSRTPRGDATVMLVGEGDKVEVHSITTGKAIGDKWLVTSGVKPGDRIILTGLQKI 369

Query: 370 REGDPVQLADASGG 383
           R G  V+  + + G
Sbjct: 370 RPGMQVKAQEVAAG 383