Pairwise Alignments

Query, 389 a.a., RND transporter MFP subunit from Pseudomonas simiae WCS417

Subject, 368 a.a., RND family efflux transporter, MFP subunit from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 94.7 bits (234), Expect = 4e-24
 Identities = 80/320 (25%), Positives = 140/320 (43%), Gaps = 19/320 (5%)

Query: 70  PAHLEAWSKAPIHARVSGYLKDWKADIGTQVKAGQILAEIDSPDLDQQMAQTHARLIQEQ 129
           P  +   ++  I  +VSGY+     + G +V  GQ L EID         Q  A L   +
Sbjct: 54  PGTVVPLNEIEIRPQVSGYINKIFVEDGQEVAKGQKLYEIDRSKYQAAYEQAQATLKSAK 113

Query: 130 ANARLAQTTATRWQNLLASHSVSRQEADEKTSNAAAAKANAEAAAADYARLSALESYKTI 189
           AN    +    R++ L    ++++Q+ D   ++   A++   +A A         +Y  I
Sbjct: 114 ANLERVKKDLARYEALDKQEAIAKQQLDYAKADILTAESQVSSAEAQVRSTLTDYNYSVI 173

Query: 190 RAPFAGTITARNTDIGQLIKAD-------TDSDPELFN-IADTHQLRLYVPVPQNYAAVI 241
            APF+GT+      +G  + A        + +DP L + + +   +R +  + +N +   
Sbjct: 174 TAPFSGTVGISQVRLGAQVSAGQSLLNTLSSNDPVLVDFVVNERDVRRFSKMMKNESL-- 231

Query: 242 HPGLEAELTVPEHPGEHFKARLIGDSTAID----RRSGTLLAQFVADNPNGELLPGDYAE 297
                 + T     GE+   R  G+ T ID    R+SGT+  +    NP+ EL+PG    
Sbjct: 232 -----PDSTFTIQFGENDVYRHHGELTTIDRAVGRQSGTINMRVEFPNPDRELIPGMTLN 286

Query: 298 ATLPIPADTHGVSIPASALIFRAQGTQVAVLDAHNHVHLQTIHIGLDLGERLVIDQGLKP 357
             +        ++IP  A+  +     V V+   + VH Q + +G  +G  +V+ +GLKP
Sbjct: 287 LRVLNQDIGDQIAIPFKAVTEQMGEYFVYVVGDDSVVHQQNVQLGTKVGAEIVVREGLKP 346

Query: 358 VDRVVDNPPDALREGDPVQL 377
             ++V      LREG  VQ+
Sbjct: 347 GQKIVVEGIQKLREGAKVQI 366