Pairwise Alignments

Query, 307 a.a., D-alanyl-D-alanine endopeptidase from Pseudomonas simiae WCS417

Subject, 386 a.a., D-alanyl-D-alanine carboxypeptidase from Pseudomonas putida KT2440

 Score = 85.1 bits (209), Expect = 2e-21
 Identities = 77/261 (29%), Positives = 129/261 (49%), Gaps = 27/261 (10%)

Query: 4   RLSLVSLLFAFTGTFAHAAETTQAPRDTSKLQIASGSAMLVDLQTNKVIYSSNPDVVVPI 63
           RL L  LL      FA A + T AP      Q+A+ S +L+D  +  V+  +N D  +P 
Sbjct: 9   RLCLPVLLLITPAAFA-AEQMTPAPP-----QLAAKSYVLMDASSGNVLVENNGDERLPP 62

Query: 64  ASVSKLMTGLVV-LEAKQN-MDEYIDINIKDTPEMKGVFSR-VKIGSEMPRKEMLLIALM 120
           AS++KLMT  +  L+ ++  + E   + + +     G     +K+GS++   ++L   ++
Sbjct: 63  ASLTKLMTAYIATLDIRRGQIGESDPVTVSENAWRTGGSRMFIKVGSQVTVSDLLHGIII 122

Query: 121 SSENRAAASLAHHYPGGYPAFIAAMNAKAKALGMTSTHYVEPTGL-SIHNVSTARDLSKL 179
            S N A+ +LA H  G   AF   MN  A  LGMT++H++ PTGL    + S+A D++ L
Sbjct: 123 QSGNDASVALAEHIAGSEDAFADMMNKTAADLGMTNSHFMNPTGLPHPEHYSSAHDMATL 182

Query: 180 LAA-----ARHYPLLSQLSTTKEKTVSFRKPNYTLGFSNTDHLINRANWDIKLTKTGFTN 234
             A       HY + SQ         + ++PN         +L+   +  +   KTG T+
Sbjct: 183 ARAIINVDPAHYAIYSQKEFFWN---NIKQPN--------RNLLLWRDKTVDGLKTGHTD 231

Query: 235 QAGHCLVL-VTNMGNRPVSLV 254
           +AG+C+V      G R +++V
Sbjct: 232 EAGYCMVASAVRDGQRLIAVV 252