Pairwise Alignments

Query, 307 a.a., D-alanyl-D-alanine endopeptidase from Pseudomonas simiae WCS417

Subject, 308 a.a., periplasmic murein D-alanyl-D-alanine endopeptidase from Pseudomonas putida KT2440

 Score =  404 bits (1038), Expect = e-117
 Identities = 203/304 (66%), Positives = 247/304 (81%), Gaps = 5/304 (1%)

Query: 1   MKIRLSLVSLLFAFTGTF-----AHAAETTQAPRDTSKLQIASGSAMLVDLQTNKVIYSS 55
           MK  LS++SLL   TGT      A A    Q  RD SKL +ASGSA+L+DL +N+ +YSS
Sbjct: 1   MKTSLSILSLLLLLTGTATLPSTAAAQPPAQVQRDPSKLHLASGSALLIDLNSNQELYSS 60

Query: 56  NPDVVVPIASVSKLMTGLVVLEAKQNMDEYIDINIKDTPEMKGVFSRVKIGSEMPRKEML 115
           + D VVPIASV+KLMT +VVL+AK  MDE + + I + PEMKGV+SRV++GS++ R+E L
Sbjct: 61  HADRVVPIASVTKLMTAMVVLDAKLPMDEMLTMTIANNPEMKGVYSRVRLGSQLDRRETL 120

Query: 116 LIALMSSENRAAASLAHHYPGGYPAFIAAMNAKAKALGMTSTHYVEPTGLSIHNVSTARD 175
           LI LMSSENRAA SLA+ YPGGYPAFI AMNAKA++LGM  T YVEPTGLS  NVSTARD
Sbjct: 121 LITLMSSENRAANSLANAYPGGYPAFIKAMNAKARSLGMAHTRYVEPTGLSTQNVSTARD 180

Query: 176 LSKLLAAARHYPLLSQLSTTKEKTVSFRKPNYTLGFSNTDHLINRANWDIKLTKTGFTNQ 235
           L+KLL A+R YP+LS+LSTT+EKTV+FRKPNYTLGF NTDHL+N++NWDIKLTKTGFTN+
Sbjct: 181 LAKLLMASRKYPMLSELSTTREKTVAFRKPNYTLGFRNTDHLVNKSNWDIKLTKTGFTNE 240

Query: 236 AGHCLVLVTNMGNRPVSLVILDAFGKFTHFADASRIRNWVETGKSGSVPDVALRYKADKN 295
           AGHCLVL+T M NRPV++VILDAFGK+THFADASR+R W+ETG +   P VA++YKAD+ 
Sbjct: 241 AGHCLVLLTRMDNRPVAMVILDAFGKYTHFADASRMRQWLETGSAKPAPAVAMQYKADRQ 300

Query: 296 LKNR 299
            K R
Sbjct: 301 NKGR 304