Pairwise Alignments

Query, 624 a.a., peptidylprolyl isomerase from Pseudomonas simiae WCS417

Subject, 439 a.a., peptidyl-prolyl cis-trans isomerase from Pseudomonas putida KT2440

 Score = 81.6 bits (200), Expect = 6e-20
 Identities = 92/405 (22%), Positives = 174/405 (42%), Gaps = 57/405 (14%)

Query: 44  VAKVNGEEITQTELSQAVDMQRRQLMQQLGKDFDASLLDEKLLREAALKGLIDRKLLLQG 103
           VA V+ + + Q++L Q V   ++ + ++ G     S L++++L       LI   L LQ 
Sbjct: 34  VAIVDNDVVMQSQLDQRVHEVQQTIAKRGGGVPPTSALEQQVLER-----LIVENLQLQI 88

Query: 104 AADSKFGFSEAALDQVILQTPEFQVDGKFSAERFDQVIRQLGYSRMQFRQMLTQEMLIGQ 163
              S    ++  L+Q I    +       S ++F   + + G S    R+ + +EM+I +
Sbjct: 89  GERSGIRITDEELNQAIGTIAQ---RNGMSLDQFRAALARDGLSFDDAREQVKREMIISR 145

Query: 164 VRAG-IAGSGFVTDSEVLAFARLE----KQTRDFATVNIKANPAAVKLTDDEVKA----- 213
           VR   +A    V++ EV  F   +    + + ++   NI         +DD  KA     
Sbjct: 146 VRQRRVAERIQVSEQEVKNFLASDLGKMQMSEEYRLANILIPTPEAANSDDIQKAARKVG 205

Query: 214 -YYDQ------------------HAKE-----FMTPDQVVIDYLELKKSSFFDQVS---- 245
             Y Q                  +A E     +    Q+  D+ ++  S    +++    
Sbjct: 206 DVYQQLRQGADFGQMAIANSASENALEGGEMGWRKAGQLPPDFAKMLSSMPVGEITQPIR 265

Query: 246 -------VKDEELQAAYQKETANLAEQRRAAHILIEVNDKVTDAQAKAKIEEIQARLAKG 298
                  +K EE +   +     L ++    HILI+ ++  ++A  +   E +  R+  G
Sbjct: 266 IPNGFIILKLEEKRGGSENV---LRDEVHVRHILIKPSEIRSEAATEQLAERLYDRIKNG 322

Query: 299 EKFEALAKEFSQDPGSANTGGDLGFAGPGVYDPDFETALYALNKDQVSAPVRSTFGWHLI 358
           E F  LAK FS+DPGSA  GGDL +  P    P+F   +    +  V+ P ++ +GWH++
Sbjct: 323 EDFGELAKSFSEDPGSALNGGDLNWVDPNSLVPEFREQMANAQQGVVTKPFKTQYGWHVL 382

Query: 359 KLLGVEAPQVPTFASLKDKLTKELKTQQVEQRFVEATKQLEDAAF 403
           ++LG  A    T  + + +    L+ ++ ++      +Q+ D A+
Sbjct: 383 EVLGRRATD-STEQAREQQALSVLRNRKYDEELQTWLRQIRDEAY 426



 Score = 45.4 bits (106), Expect = 5e-09
 Identities = 65/293 (22%), Positives = 126/293 (43%), Gaps = 38/293 (12%)

Query: 242 DQVSVKDEELQAAYQKETANL--AEQRRAAHILIEVNDKVTD---AQAKAKIEEIQARLA 296
           +++ V ++E++     +   +  +E+ R A+ILI   +        +A  K+ ++  +L 
Sbjct: 153 ERIQVSEQEVKNFLASDLGKMQMSEEYRLANILIPTPEAANSDDIQKAARKVGDVYQQLR 212

Query: 297 KGEKFEALAKEFSQDPGSANTGGDLGFAGPGVYDPDFETALYALNKDQVSAPVRSTFGWH 356
           +G  F  +A   S    +A  GG++G+   G   PDF   L ++   +++ P+R   G+ 
Sbjct: 213 QGADFGQMAIANSASE-NALEGGEMGWRKAGQLPPDFAKMLSSMPVGEITQPIRIPNGFI 271

Query: 357 LIKLLGVEAPQVPTFASLKD------------KLTKELKTQQVEQRFVEATKQLEDAAFE 404
           ++KL   E  +  +   L+D            ++  E  T+Q+ +R  +  K  ED    
Sbjct: 272 ILKL---EEKRGGSENVLRDEVHVRHILIKPSEIRSEAATEQLAERLYDRIKNGEDFGEL 328

Query: 405 ASDLAQ-PASDLK------LTVHTSAPFGREGGEGVAANRAVVTAAFSP-------EVLD 450
           A   ++ P S L       +  ++  P  RE  +   A + VVT  F         EVL 
Sbjct: 329 AKSFSEDPGSALNGGDLNWVDPNSLVPEFRE--QMANAQQGVVTKPFKTQYGWHVLEVLG 386

Query: 451 EGA-NSTAIELDPETIIVLRAKEHLKPSQLPLESVSAAIRTQMAKERASAAAK 502
             A +ST    + + + VLR +++ +  Q  L  +      ++    A  AA+
Sbjct: 387 RRATDSTEQAREQQALSVLRNRKYDEELQTWLRQIRDEAYVEIKLPGADQAAQ 439