Pairwise Alignments

Query, 401 a.a., MFS transporter from Pseudomonas simiae WCS417

Subject, 391 a.a., putative inner membrane transport protein from Pseudomonas putida KT2440

 Score =  155 bits (393), Expect = 1e-42
 Identities = 127/389 (32%), Positives = 197/389 (50%), Gaps = 21/389 (5%)

Query: 21  LLALASAGFITILTEAMPAGLLPQIGEGLGVSPALVGQMVTVYALGSLLAAIPLTLLTRG 80
           L+ALA   F   +TE  P G+LP I   LGVS    G +V+ YA+G L+ A  +TL T  
Sbjct: 7   LVALAIGAFGIGVTEFAPMGMLPSIATDLGVSIPAAGLLVSAYAIGVLIGAPLMTLATVK 66

Query: 81  WRRRPLLLLAIGGFALVNSVTALSSHYGLTLVARFLAGVWAGLLWALLAGYASRMVAPHL 140
             RR LL+  +  F L N ++AL+S Y   LVAR +  +  G  + + +  A+ +V P  
Sbjct: 67  IPRRYLLIGLMAIFTLGNLMSALASDYASLLVARVVTSLNHGAFFGIGSIVAASVVPPEK 126

Query: 141 QGRAIAVAMLGAPLALSLGVPAGTFLGAAVGWRLSFAIMTGLTLVLLAWARWQLPDFAGE 200
           +  A+A   +G  LA   GVP  T+LG  +GWR +F  + GL LV +    + LP+ A  
Sbjct: 127 RAGAVAAMFMGLTLATIGGVPLATWLGEMLGWRTAFWGIAGLGLVAMTTLWYALPNVA-S 185

Query: 201 PAGKRLGLHQVLTLPGIRPVLWVTFTYVLAHNIL---YTYIAPLLVPAGIAAD--IDQVL 255
           P G+  G    + + G RPVL      V+  + +   +TYIAP+L     A+   +  +L
Sbjct: 186 PKGE--GAMAEIRVLGRRPVLAALLLTVVGSSAMFTVFTYIAPILQHEAAASTPFVTAML 243

Query: 256 LVFGLAALLSIWMAGVLIDRWLRVLLLISCTMFGLIALALAFWINL--PAVIYVAVALWG 313
           ++FG+   L     G   DR +   L++S  + GLIA+ L F + L  P    +A+ +WG
Sbjct: 244 VLFGVGLTLGNVWGGKAADRSIDRTLILS--LAGLIAVLLVFPLVLDWPLPTALAILVWG 301

Query: 314 LAFGGLPALLQTALAQSAGESADAAQSMLVTVWNLGIAGGGLVGGVLLQGW--------- 364
            A   L   LQ  + ++A ++ + A ++ +  +NLG A G  +GG ++            
Sbjct: 302 AASFALVPPLQMRVMEAAKDAPNLASAVNIGAFNLGNAIGAALGGAVINAGLGYPAISLA 361

Query: 365 GACAFAWAVVLLMLLAVAGGLQTAPQQLA 393
           GA   A  +VL++L A  G    A  Q+A
Sbjct: 362 GAAMAALGLVLVLLFAWRGRGVVAGGQVA 390