Pairwise Alignments

Query, 342 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 334 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  117 bits (293), Expect = 4e-31
 Identities = 96/344 (27%), Positives = 154/344 (44%), Gaps = 36/344 (10%)

Query: 13  FVHALADAIHSHGLDPQPLLLQYGLDPARLAEAGARLSIPRYMRLGHAAIQLTGDPGLGL 72
           +  AL   + + GLD   L LQ GLDP ++ +  AR  +    RL   A+Q +GDP +GL
Sbjct: 10  WTRALRKQLDALGLDSAALCLQAGLDPQKMDDPNARYPLSATTRLWELAVQASGDPAIGL 69

Query: 73  RMGQLSRLSQGGLAGVTAAQAPNVREAARALTRFEALYGSNYRGQSSFVEDAEGAWLRFY 132
           R+ +    +     G     + ++RE    + R+  +       + S     +G   RF 
Sbjct: 70  RVSRFVSATTFHALGYALVASGSLREVFERIVRYHQVVSDALSLELS----GDGERYRFR 125

Query: 133 SI----SPYNAYNRFVVDSIIAGWLQ--------QLSSLA-----QQPVQAQRIDIEFEA 175
            +    SP  A+    +D+  A +++        + + LA      +PV  +     F A
Sbjct: 126 LLQLPGSPAPAFE--AIDAFAAIYVRTCRNRLGREYAPLAVYLRRPEPVDPKPWHTVFRA 183

Query: 176 PEYSDQYSVLGDVHFGAEANQLRLNQQTLALRNPQHCPSTWNLLLQLCERELVQLTRTRS 235
           P           V F AE ++L               P        + +R L QL +  +
Sbjct: 184 P-----------VFFDAEEDRLEFAAADFDSHLDDANPELAEHNETVLKRTLAQL-QPLT 231

Query: 236 LRERITRLLGPMLNGGREPDLEEVAARLKLPTWTLRRKLADEGTQFRAILNDTRRDLAMT 295
              ++   +   L  G EP  E +A  L L   +L+R LADEG +F A+L++ R +LA+ 
Sbjct: 232 WERKVRAAIEAQLPDG-EPSAERIAQALHLSLRSLQRHLADEGCRFDALLSECRENLALL 290

Query: 296 YIRDTELAFGEIAYLLGFASAQAFQRAFRRWNNQTPGEFRRSQR 339
           ++RD   +  EI++LLGFA   +F RAF+RW   TPG+FR   R
Sbjct: 291 HLRDPHCSLAEISHLLGFADTSSFNRAFKRWTGMTPGQFRDGLR 334