Pairwise Alignments

Query, 342 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 356 a.a., transcriptional regulator, ornithine utilization from Pseudomonas putida KT2440

 Score =  103 bits (257), Expect = 7e-27
 Identities = 79/324 (24%), Positives = 144/324 (44%), Gaps = 8/324 (2%)

Query: 14  VHALADAIHSHGLDPQPLLLQYGLDPARLAEAGARLSIPRYMRLGHAAIQLTGDPGLGLR 73
           V  + +   + G +   LL   G+ PA L  A AR++  + +++   A+    D  +GL 
Sbjct: 38  VSLILNVFQADGCEASALLAGSGIGPADLGHADARITTQQELQVCANAVARRED--IGLE 95

Query: 74  MGQLSRLSQGGLAGVTAAQAPNVREAARALTRFEALYGSNYRGQSSFVEDAEGAWLRFYS 133
           +GQ  R+S  G+ G     +  + +A R   ++ AL G+ ++ +   ++D +  W     
Sbjct: 96  LGQRMRVSCYGMLGYALLSSATLGDALRLALQYPALLGTVFKLR--LLDDGQRVWFSASD 153

Query: 134 ISPYNAYNRFVVDSIIAGWLQQLSSLAQQPVQAQRIDIEFEAPEYSDQYSVLGD--VHFG 191
                A + F  +  +         L  +P+       E   P Y   Y+      + F 
Sbjct: 154 YQDSPALSAFNAEFCLVSLKVICDDLLGRPLPLLGARFEHPRPGYHALYAGAFQCPIGFA 213

Query: 192 AEANQLRLNQQTLALRNPQHCPSTWNLLLQLCERELVQLTRTRSLRERITRLLGPMLNGG 251
           AE N     ++ L +  P   P T   + + C R  ++ T  ++   RI +LL   L+  
Sbjct: 214 AEDNAFAFERRWLDMPLPLADPITHKAMSERCRRLNLEFTGRQAWLGRIRQLLAQQLDAA 273

Query: 252 REPDLEEVAARLKLPTWTLRRKLADEGTQFRAILNDTRRDLAMTYIRDTELAFGEIAYLL 311
             P LE +A ++   + TLRR L   G+ ++ +L++ R + A   + D ++    IA  L
Sbjct: 274 --PGLEGLARQMNCSSRTLRRHLQALGSSYQQLLDELRFERAKQLLADEQMPIYRIAETL 331

Query: 312 GFASAQAFQRAFRRWNNQTPGEFR 335
           GF+   +F+ AF+RW+   P  FR
Sbjct: 332 GFSETASFRHAFQRWSGVAPSHFR 355