Pairwise Alignments

Query, 342 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 326 a.a., putative transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score =  117 bits (293), Expect = 4e-31
 Identities = 91/304 (29%), Positives = 145/304 (47%), Gaps = 6/304 (1%)

Query: 34  QYGLDPARLAEAGARLSIPRYMRLGHAAIQLTGDPGLGLRMGQLSRLSQGGLAGVTAAQA 93
           Q GLD A L +  AR       RL   A++L+G+  +GL M ++ R +   + G     +
Sbjct: 4   QLGLDFAALDDPDARFPQDSMTRLWQLAVELSGNEAIGLNMARVVRPASFHVVGYALMSS 63

Query: 94  PNVREAARALTRFEALYGSNYRGQSSFVEDAEGAWLRFYSISPYNAYNRFVVDSIIAGWL 153
             + E    L R++ +   +     SFV   EG  L       +    R   ++ +A  L
Sbjct: 64  RTLAEGFERLVRYQRIIAES--SDLSFVLGPEGYSLILTVHGDHLPPTRHSAEASLACAL 121

Query: 154 QQLSSLAQQPVQAQRIDIEFEAPEYSDQYSVL--GDVHFGAEANQLRLNQQTLALRNPQH 211
                L+ +PVQ +R+ ++   P+  + Y V     + FGA  + L   +  +    P  
Sbjct: 122 ALCKWLSGRPVQPRRVLVQGPQPKNVEPYKVAFHSPLVFGAPHDALVFERADMEAPLPTA 181

Query: 212 CPSTWNLLLQLCERELVQLTRTRSLRERITRLLGPMLNGGREPDLEEVAARLKLPTWTLR 271
             +   L  +     L + + +R +  R+ ++L  +L  G EP  E +A  L L   TL+
Sbjct: 182 NEAMAVLHDRFAGEYLARFSESR-VSHRVRQVLCRILPQG-EPKRETLAQALHLSQRTLQ 239

Query: 272 RKLADEGTQFRAILNDTRRDLAMTYIRDTELAFGEIAYLLGFASAQAFQRAFRRWNNQTP 331
           R+L +EGT F+ +L+DTRR+LA  Y+    +   E AYLLGFA    F RAFRRW + TP
Sbjct: 240 RRLQEEGTSFQTLLDDTRRELAEQYLAQPGMTLLETAYLLGFADPSNFYRAFRRWFDATP 299

Query: 332 GEFR 335
            E+R
Sbjct: 300 SEYR 303