Pairwise Alignments

Query, 342 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 346 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score =  482 bits (1240), Expect = e-141
 Identities = 241/338 (71%), Positives = 279/338 (82%), Gaps = 2/338 (0%)

Query: 4   VRLGDLSVGFVHALADAIHSHGLDPQPLLLQYGLDPARLAEAGARLSIPRYMRLGHAAIQ 63
           VRLG+LSVGFV  L++A+   G DP+PLL +YGLD  RL+EAGARLSIPRYM +GHAAI+
Sbjct: 6   VRLGELSVGFVQPLSEALRELGHDPEPLLRRYGLDATRLSEAGARLSIPRYMHMGHAAIE 65

Query: 64  LTGDPGLGLRMGQLSRLSQGGLAGVTAAQAPNVREAARALTRFEALYGSNYRGQSSFVED 123
           ++G+  LGLRMG+LSRL+  GLAGVTAAQAP + EAAR L RFE LY +NYRG S F ED
Sbjct: 66  MSGEAALGLRMGRLSRLAHTGLAGVTAAQAPTLGEAARTLLRFEPLYAANYRGHSRFEED 125

Query: 124 AEGAWLRFYSISPYNAYNRFVVDSIIAGWLQQLSSLAQQPVQAQRIDIEFEAPEYSDQYS 183
           A+GAWLRFYSISPYN YNRFVVDS++AGWL QL+ LA  PVQA+R++IEF AP Y+ +Y 
Sbjct: 126 AQGAWLRFYSISPYNDYNRFVVDSLLAGWLAQLAELAGTPVQAERLEIEFAAPSYAARYQ 185

Query: 184 VL--GDVHFGAEANQLRLNQQTLALRNPQHCPSTWNLLLQLCERELVQLTRTRSLRERIT 241
            L    V F A+ NQLRL++ TL L NP HCPSTW  LLQLCE EL+Q TR RSL ERIT
Sbjct: 186 PLCSTPVQFAADGNQLRLSRATLQLANPGHCPSTWQHLLQLCEAELLQRTRVRSLGERIT 245

Query: 242 RLLGPMLNGGREPDLEEVAARLKLPTWTLRRKLADEGTQFRAILNDTRRDLAMTYIRDTE 301
            LLGP+LNGGREPDLEEVA  L+LP+WTLRRKLA+EGT+FR +LN+TRRDLA TYIRDT 
Sbjct: 246 HLLGPLLNGGREPDLEEVALHLQLPSWTLRRKLAEEGTRFRDLLNETRRDLAETYIRDTA 305

Query: 302 LAFGEIAYLLGFASAQAFQRAFRRWNNQTPGEFRRSQR 339
           LAFGEIAYLLGFASA+AFQRAF+RW   TPGEFRRSQR
Sbjct: 306 LAFGEIAYLLGFASAEAFQRAFKRWTGLTPGEFRRSQR 343