Pairwise Alignments

Query, 235 a.a., transcriptional regulator from Pseudomonas simiae WCS417

Subject, 248 a.a., hypothetical protein from Pseudomonas simiae WCS417

 Score =  127 bits (319), Expect = 2e-34
 Identities = 85/233 (36%), Positives = 132/233 (56%), Gaps = 8/233 (3%)

Query: 3   AQW-KVKHKEAAANAK-GKIFGKLVKEITIAARNGA-DTSTNAHLRLVVEQAKKASMPKE 59
           ++W  +KH++   +AK GKIF K ++E+T+AAR G  D  +N  LRL +++A  A+M ++
Sbjct: 5   SKWANIKHRKERQDAKKGKIFTKWIRELTVAARQGGGDPGSNPRLRLALDKALGANMSRD 64

Query: 60  TLDRAIKKGAGLLGETVQYHRVTYEGFAPHQVPLIVECVTDNINRTVAEIRVAFRK--GQ 117
            +DRA+ +GAG   +T     ++YEG+ P  V ++VEC+TDN NRT A +R AF K  G 
Sbjct: 65  IIDRAVARGAGA-ADTDDMVELSYEGYGPGGVAVMVECMTDNRNRTAAAVRHAFSKCGGN 123

Query: 118 LGASGSVAWDFNHVGLIEASPDSPDADPEMAAIEAGAQDFEEGEEEGTTLFITETTDLDA 177
           LG  GSVA+ F   G I  +P + +     AA+EA A D    E+    +F T      A
Sbjct: 124 LGTDGSVAYLFERKGQITFAPGTDEDALMEAAMEADADDVVTNEDGSIDVF-TSFAGFYA 182

Query: 178 VQKALPEQGFTVLSAKLGYISKNPVSGLSDEQMAEVEAFLEGLDNHDDVQDMF 230
           V+ AL   GF    A++  +       L  +   +V   L+ L++ DDVQ+++
Sbjct: 183 VRNALEAAGFKGTDAEIVMLPTTSAE-LDLDGAQKVLKMLDMLEDLDDVQNVY 234