Pairwise Alignments

Query, 235 a.a., transcriptional regulator from Pseudomonas simiae WCS417

Subject, 247 a.a., Probable transcriptional regulatory protein YebC from Sphingobium sp. HT1-2

 Score =  127 bits (318), Expect = 3e-34
 Identities = 87/229 (37%), Positives = 123/229 (53%), Gaps = 10/229 (4%)

Query: 7   VKHKEAAANAK-GKIFGKLVKEITIAARNGA-DTSTNAHLRLVVEQAKKASMPKETLDRA 64
           + H++ A + K   +F KL +EIT+AA+ G  D   N  LRL V  AK  SMPK+ + RA
Sbjct: 10  IMHRKGAQDKKRSSMFSKLSREITVAAKMGMPDPDMNPRLRLAVNAAKAQSMPKDNIQRA 69

Query: 65  IKKGAGLLGETVQYHRVTYEGFAPHQVPLIVECVTDNINRTVAEIRVAFRK--GQLGASG 122
           I K  G  G+   Y  + YEG+ P  V +IVE +TDN NRT   +R AF K  G LGASG
Sbjct: 70  IDKAIG--GDMENYEEIRYEGYGPGGVAIIVEALTDNRNRTATNVRTAFAKNGGNLGASG 127

Query: 123 SVAWDFNHVGLIEASPDSPDADPEM-AAIEAGAQDFEEGEEEGTTLFITETTDLDAVQKA 181
           +V+  F+ +GLI     + DAD    AA+EAGA D    E+E      T    L  V KA
Sbjct: 128 AVSHGFDRLGLITYPASAGDADAVFEAALEAGADDVSSNEDEHE--IWTAMDALHEVAKA 185

Query: 182 LPEQGFTVLSAKLGYISKNPVSGLSDEQMAEVEAFLEGLDNHDDVQDMF 230
           L  +      AKL +  +  +  + +   A +   ++ L++ DDVQ ++
Sbjct: 186 LEAKLGPAEGAKLAWKPQTTLE-VDEANAATLLKLVDTLEDDDDVQTVW 233