Pairwise Alignments

Query, 786 a.a., fimbrial assembly protein from Pseudomonas simiae WCS417

Subject, 828 a.a., fimbrial protein from Pseudomonas simiae WCS417

 Score =  113 bits (283), Expect = 4e-29
 Identities = 155/698 (22%), Positives = 270/698 (38%), Gaps = 84/698 (12%)

Query: 117 VPPAWLKEQFIGNRNAYPRTQAMSSFGALLNYDLYFSDTDEGGSYLAAWNEVRLFDNWGT 176
           VP A++  Q   NR++      +S+   L N           G  L  W   RL +    
Sbjct: 165 VPAAFMNYQLSSNRSSNDANTTLSNNLGLRN-----------GINLGGW---RLRNESNF 210

Query: 177 LSNTGQYRQTLADGVSSSTF--NNGYRRYDTTWRFSDDERLLTYEAGDVISGALPWSSSV 234
            S+TG+          SSTF  N  Y ++D T           + AGD+ S A     SV
Sbjct: 211 SSSTGR----------SSTFKSNRSYLQHDLTALKGQ------FSAGDIFSDA-DLFDSV 253

Query: 235 RLGGVQFSRDFAVRPDLVTYPLPQFAGEAAVPSSVDLFINGYKSDSALLQPGPYTLTNVP 294
           R  G++ + D  +R D      P   G A   ++V++  N Y   +A + PGP+ ++++ 
Sbjct: 254 RYRGLKMASDDGMRADSERGYAPIIRGVAQSSATVEIRQNNYILYTANVPPGPFEISDIY 313

Query: 295 FINGAGEAVVVTTDALGRQVSTTVPFYVTSTLLQKGLTDFSVAAGSLRREYTLKDFAYGP 354
                G+  V   +A GR+  T   F     ++++G   +S++AG         D    P
Sbjct: 314 PSGSNGDLEVTVIEADGRRRVTVQAFSSLPIMVREGQVKYSLSAGQYNSN---SDGQKTP 370

Query: 355 GVASGTFRYGYSDNLTLESHAEASSDLTL--GGLGGNLRLG------------NFGVLNT 400
              S T  YG S NL+     +A+ D      G G N  +G             FG   T
Sbjct: 371 QFVSSTLAYGISSNLSGIVGVQATQDFQALSVGAGRNTSIGAVSLDMTHSASRTFGRQVT 430

Query: 401 -----AVSQSQFEGRGGQQMSLGYQYNSMRYSLSYQRVERRDEYADLTLVDTPYASLSKR 455
                A+    F G         Y+Y++  Y    + VE      +L+     +   SK 
Sbjct: 431 GNSLRALYAKTFTGTDTNFTLAAYRYSTEGYRTLTEHVE------ELSSDGRTHLGNSKT 484

Query: 456 SEQVTLSLNL---ERFGSLGVGYFDVQAADDSRTRLLNLSWSKPLWRNTSFYLSANR--- 509
              +T++ +L   ++FGS+ +   D +       + L+  +S   WR+ ++ LSA     
Sbjct: 485 RTDLTVNQSLGRNQQFGSVYLNASDQRYWGRGGAQSLSAGYSN-YWRDVTYNLSATHTKD 543

Query: 510 --EIGDSNWAMQAQLVIPFDLNGS-------LALSTERSKDGASRQRLNYSSAVPSEGGV 560
               G SN      L + F L          ++ ST++  D     ++  +  +  +   
Sbjct: 544 VGNYGPSNNDTLINLSLSFPLGSKPRAPRAFVSASTQKDND---TTQMGVNGYLTEDSNT 600

Query: 561 GYNLGYAQGD-GPAYRQADLTWRLQSVQLQAGVYGSSDAETRWADASGSLVWMGGDTFAA 619
            Y+L       G +   A+L+ R   + +  G         +  + +GS+V   G     
Sbjct: 601 YYSLQAGNSSTGGSTGSANLSTRTALMDISGGYSQGRGYSAQNLNVAGSVVAHAGGINLG 660

Query: 620 NRINDAFVVVSTQGFAGIPVRYENQLVGETDRNGHLLVPWSSAYYRAKYEIDPLNLPLNV 679
             + + F +   +G  G  V+  +     T  NG+ ++P +  Y      +D  +L  ++
Sbjct: 661 QTVGETFALAQVEGVPG--VKISSFSGARTGSNGYAVIPNTQPYRVNWISLDTRDLGADI 718

Query: 680 QSPNVEQRVSVRRGSGYLLEFPLRRVLAASVTLVDTQHQELPLGSLLVHEQSNQQAVVGW 739
           +  N  Q+V  RRG+  L  +  +        L D QH+ +P G+ L      Q A+   
Sbjct: 719 EIDNATQQVVPRRGAVVLARYASKSGRRVQFALFDAQHRPIPFGASLESMAGKQMAIADP 778

Query: 740 DGLVYLENLSAHNTLQVTLGDGRTCQARFDIDEQQQGV 777
            G           TL +   D + CQA + + E+ + +
Sbjct: 779 GGKALALVEEDTGTLVIKWAD-QHCQAPYALGERNKAL 815