Pairwise Alignments

Query, 168 a.a., RNA polymerase subunit sigma-24 from Pseudomonas simiae WCS417

Subject, 173 a.a., hypothetical protein from Sphingobium sp. HT1-2

 Score = 97.4 bits (241), Expect = 1e-25
 Identities = 66/154 (42%), Positives = 86/154 (55%), Gaps = 4/154 (2%)

Query: 10  ELIPRLRRFAVSLTRNASSADDLVQSTLERAIISWADKRVEG-DLRAWLFSILYRQFLDA 68
           +L+P L R+A  LT N S A+DLVQ  L RA  + AD    G  LR WLFSIL+  F+  
Sbjct: 10  DLLPALMRYARRLTGNESDAEDLVQDALVRAYAN-ADSYQRGRPLRVWLFSILHNVFVSG 68

Query: 69  HRRT--RRYARMLEFFTGRDDAQPSVERTVIAQSTLQAFDQLNTEQRALLLWVSVEGLSY 126
            RR   R   R          A P+ E+ V       A   L  EQ+ +L  V+VEGLSY
Sbjct: 69  TRRAAVRERFRADAVAQAEPVAAPAQEQMVRLHQIEAALTALPEEQQTVLHLVAVEGLSY 128

Query: 127 KEIAEILEVPIGTVMSRLSRARQALRLLSDGEIA 160
           ++ A+ + +PIGT++SRLSRAR  LR L +G  A
Sbjct: 129 QDAADAIGIPIGTLISRLSRARAKLRALEEGASA 162