Pairwise Alignments

Query, 168 a.a., RNA polymerase subunit sigma-24 from Pseudomonas simiae WCS417

Subject, 169 a.a., RNA polymerase sigma factor, sigma-70 family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 63.9 bits (154), Expect = 1e-15
 Identities = 47/158 (29%), Positives = 81/158 (51%), Gaps = 10/158 (6%)

Query: 3   ELDEQLRELIPRLRRFAVSLTRNASSADDLVQSTLERAIISWADKRVEG-DLRAWLFSIL 61
           E    + E    L+ FA+ LT++   A+DL+Q T+ +A  +  DK  +G +LRAWL++I+
Sbjct: 5   EFSYSINEHSKSLKPFALRLTKDVDDANDLLQETMLKAYTN-RDKFSDGTNLRAWLYTIM 63

Query: 62  YRQFLDAHRRTRRYARM------LEFFTGRDDAQPSVERTVIAQSTLQ-AFDQLNTEQRA 114
              F   ++R  R A        L +    D +  +   +  A   +    + LN + R 
Sbjct: 64  KNTFFTRYQRMVRRATFVDSTDNLHYINSGDVSIENRAHSKFAMDDINYCINHLNADYRT 123

Query: 115 LLLWVSVEGLSYKEIAEILEVPIGTVMSRLSRARQALR 152
             + +  +G  Y+EIA+ L +PIGTV +R+  AR+ L+
Sbjct: 124 PFM-MYFKGFKYQEIADDLNLPIGTVKNRIHLARKILK 160