Pairwise Alignments

Query, 425 a.a., transporter from Pseudomonas simiae WCS417

Subject, 384 a.a., MFS transporter from Pseudomonas simiae WCS417

 Score =  261 bits (667), Expect = 3e-74
 Identities = 151/376 (40%), Positives = 227/376 (60%), Gaps = 3/376 (0%)

Query: 12  VVLLLAVACGLSVANVYYAQPLLDAMAETFAMDHATVGIIIALTQVGYGVGLLLLVPLGD 71
           +V+L A  CG  VAN+YYAQP+++ +A    +  A   +I++LTQ+GY +GL  LVPLGD
Sbjct: 1   MVMLFAFCCGAIVANIYYAQPIIELIAPDIGLTPAMASLIVSLTQIGYALGLFFLVPLGD 60

Query: 72  LLNRRRLIVSQLLLSTLAVLMVGWSSSSFWLLAGMALTGLLAVVAQVLVALAAHLASPEQ 131
           LL  R+L+++  +L+  ++L   ++      L    L G  +V  Q+L+ LAAHLA  E 
Sbjct: 61  LLENRKLMIATTVLAIASLLGAAFTEQPNLFLLVSLLIGFSSVSVQILIPLAAHLAPAES 120

Query: 132 RGHVVGLVTSGIVVGLLLARSVSGAMADLAGWRSVYLLSAGLTLLMAILLWRVLPSTEPP 191
           RG VVG +  G+++G+LLAR VS  +AD  GWR++++ +A L  L++++L   +P  +P 
Sbjct: 121 RGRVVGSIMGGLLLGILLARPVSSVVADHFGWRAMFMAAAALMALISVVLLITIPKRQPD 180

Query: 192 RASGTYGALIRSVFSLFKEEKVLRDRAVLAMLIFAAGTVLWTPLVLPLSAPPLSLSHTQI 251
             S TYG L+RS+ +L +E+ VLR RA     +FA  ++ WT   L L A    LS ++I
Sbjct: 181 H-SATYGQLLRSLGTLLREQPVLRQRAFYQGCMFATFSLFWTAAPLEL-ARNHGLSQSEI 238

Query: 252 GLFGLAGATGALGAAHAGRLADQGLAQWTSGTALLLMLLSWV-AIGFTQSSLWALLLGVI 310
            LF L GA GA+ A  AGRLAD G     S  A+L   LS++ A      S+  L +  +
Sbjct: 239 ALFALVGALGAIAAPVAGRLADAGHTHRASLLAMLFAALSFLPAFVHPLYSVIGLAVTGV 298

Query: 311 VFDLGLQAVHVTSQSLIYAVRPNAQSRLVAGYMLFYSVGSALGSISATAMYAWGGWIGVC 370
           V D  +Q   V  Q  IYA+  N++SRL A YM    +G A GS  A+++Y  GGW+GV 
Sbjct: 299 VLDFCVQMNMVLGQRAIYALDANSRSRLNALYMTSIFIGGAFGSAIASSVYEHGGWLGVM 358

Query: 371 VLGAAINLLALVYWLA 386
           ++G+A  L+AL+ +L+
Sbjct: 359 LVGSAFPLIALLRFLS 374



 Score = 25.8 bits (55), Expect = 0.002
 Identities = 46/212 (21%), Positives = 83/212 (39%), Gaps = 21/212 (9%)

Query: 219 VLAMLIFAAGTVL----WTPLVLPLSAPPLSLSHTQIGLFGLAGATG-ALGAAHAGRLAD 273
           ++ +  F  G ++    +   ++ L AP + L+     L       G ALG      L D
Sbjct: 1   MVMLFAFCCGAIVANIYYAQPIIELIAPDIGLTPAMASLIVSLTQIGYALGLFFLVPLGD 60

Query: 274 QGLAQWTSGTALLLMLLSWVAIGFTQSSLWALLLGVIVFDLGLQAVHVTSQSLIYAVRPN 333
               +       +L + S +   FT+     LL+ +++   G  +V V     + A    
Sbjct: 61  LLENRKLMIATTVLAIASLLGAAFTEQPNLFLLVSLLI---GFSSVSVQILIPLAAHLAP 117

Query: 334 AQSR------LVAGYMLFYSVGSALGSISATAMYAWGGWIGVCVLGAAINLLALVYWLAT 387
           A+SR      ++ G +L   +   + S+ A       GW  + +  AA+  L  V  L T
Sbjct: 118 AESRGRVVGSIMGGLLLGILLARPVSSVVADHF----GWRAMFMAAAALMALISVVLLIT 173

Query: 388 LPPKPVSVLAAGHALQHAVTT---DQPVEQGR 416
           +P +     A    L  ++ T   +QPV + R
Sbjct: 174 IPKRQPDHSATYGQLLRSLGTLLREQPVLRQR 205