Pairwise Alignments

Query, 425 a.a., transporter from Pseudomonas simiae WCS417

Subject, 401 a.a., Major facilitator family transporter from Pseudomonas putida KT2440

 Score =  388 bits (996), Expect = e-112
 Identities = 197/374 (52%), Positives = 269/374 (71%)

Query: 12  VVLLLAVACGLSVANVYYAQPLLDAMAETFAMDHATVGIIIALTQVGYGVGLLLLVPLGD 71
           + LLLA    ++VA VY+AQPLL++MA    +    +G ++  TQ GY +GLLL+VPLGD
Sbjct: 9   ITLLLATTSAMAVATVYFAQPLLESMAAELGVAQQQIGWVVGATQAGYALGLLLIVPLGD 68

Query: 72  LLNRRRLIVSQLLLSTLAVLMVGWSSSSFWLLAGMALTGLLAVVAQVLVALAAHLASPEQ 131
           L++R+RL++ QLL + LA++ VG + +   LL  +A+TGL+AV+ QV+VA AA LASP Q
Sbjct: 69  LVDRKRLLLGQLLFAALALVGVGMAPNWAILLLALAITGLMAVMVQVMVAHAASLASPGQ 128

Query: 132 RGHVVGLVTSGIVVGLLLARSVSGAMADLAGWRSVYLLSAGLTLLMAILLWRVLPSTEPP 191
           +G  VG VTSG+V+G+LLAR  SG +ADLAGWRSVYL SAGL +L+A++LWR LP  +P 
Sbjct: 129 QGQAVGTVTSGVVLGILLARLASGGLADLAGWRSVYLASAGLLMLLALVLWRSLPGGQPM 188

Query: 192 RASGTYGALIRSVFSLFKEEKVLRDRAVLAMLIFAAGTVLWTPLVLPLSAPPLSLSHTQI 251
                Y ALI + FSL++ +++LR R V  +LIFAA +VLW+ +V+PLSA PL+LSHT+I
Sbjct: 189 GIRPGYRALIVAQFSLYRHDRLLRQRGVFGVLIFAAFSVLWSAMVMPLSAAPLTLSHTEI 248

Query: 252 GLFGLAGATGALGAAHAGRLADQGLAQWTSGTALLLMLLSWVAIGFTQSSLWALLLGVIV 311
           GLFGLAG  G L A+HAGRLAD G  + T+G +L L+ LSW+   F + SL A +LGV++
Sbjct: 249 GLFGLAGVAGTLAASHAGRLADLGRGECTTGVSLALLTLSWLPTAFVEHSLLAFVLGVLM 308

Query: 312 FDLGLQAVHVTSQSLIYAVRPNAQSRLVAGYMLFYSVGSALGSISATAMYAWGGWIGVCV 371
            D  +QAVHVT+QSL+ A R    SRL+  YM  YS+GS LG++ A+ ++A  GW+ VC 
Sbjct: 309 LDFAVQAVHVTNQSLLLAGRGAMASRLIGAYMCCYSLGSGLGAVLASWVFAHWGWVAVCG 368

Query: 372 LGAAINLLALVYWL 385
           LG  I+  AL YWL
Sbjct: 369 LGMGISAAALCYWL 382



 Score = 36.2 bits (82), Expect = 2e-06
 Identities = 49/181 (27%), Positives = 72/181 (39%), Gaps = 7/181 (3%)

Query: 226 AAGTVLWTPLVLPLSAPPLSLSHTQIG-LFGLAGATGALGAAHAGRLADQGLAQWTSGTA 284
           A  TV +   +L   A  L ++  QIG + G   A  ALG      L D    +      
Sbjct: 20  AVATVYFAQPLLESMAAELGVAQQQIGWVVGATQAGYALGLLLIVPLGDLVDRKRLLLGQ 79

Query: 285 LLLMLLSWVAIGFTQSSLWALLLGVIVFDLGLQAVHVTSQSLIYA--VRPNAQSRLVAGY 342
           LL   L+ V +G   +  WA+LL  +    GL AV V       A    P  Q + V   
Sbjct: 80  LLFAALALVGVGMAPN--WAILLLALAIT-GLMAVMVQVMVAHAASLASPGQQGQAVGTV 136

Query: 343 MLFYSVGSALGSISATAMYAWGGWIGVCVLGAA-INLLALVYWLATLPPKPVSVLAAGHA 401
                +G  L  +++  +    GW  V +  A  + LLALV W +    +P+ +     A
Sbjct: 137 TSGVVLGILLARLASGGLADLAGWRSVYLASAGLLMLLALVLWRSLPGGQPMGIRPGYRA 196

Query: 402 L 402
           L
Sbjct: 197 L 197