Pairwise Alignments

Query, 425 a.a., transporter from Pseudomonas simiae WCS417

Subject, 390 a.a., Arabinose efflux permease from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 81.3 bits (199), Expect = 5e-20
 Identities = 83/307 (27%), Positives = 126/307 (41%), Gaps = 25/307 (8%)

Query: 15  LLAVACGLSVANVYYAQPLLDAMAETFAMDHATVGIIIALTQVGYGVGLLLLVPLGDLLN 74
           LLA+A  L     Y   PL+  ++E F +    +G++I    + YG+ +L    L D   
Sbjct: 12  LLALAASLIFFQAYMIAPLIPKLSEVFGVTEQYIGLVIPAYMITYGISILFYGVLSDRFG 71

Query: 75  RRRLIVSQLLLSTLAVLMVGWSSSSFWLLAGMALTGLLAV-VAQVLVALAAHLASPEQRG 133
           R R+I   LL   L   +   + +S  L+     TGL A  V  + +AL   L  P +RG
Sbjct: 72  RMRIIRFSLLAFILLTALTALAQTSSQLIMLRLFTGLGASGVIPMALALVGDLYEPHERG 131

Query: 134 HVVGLVTSGIVVGLLLARSVSGAMADLAGWRSVYLLSAGLTLLMAILLWRV-----LPST 188
             +GL+ + +  G+ L  +    +    GWR ++L   G+ +L AI+LW +       S 
Sbjct: 132 KPLGLLFAAMEGGMALGSTAGVVLEPFIGWRMLFL---GIAILGAIILWFISFQIDFKSQ 188

Query: 189 EPPRASGTYGALIRSVFSLFKEEKVLRD-RAVLAMLIFAAGTVLWTPLVLPLSAPPLSLS 247
           +P         +    F L    +  +   +V    IF +G   W      +      L 
Sbjct: 189 KPELNKPNVRQVFSKFFHLLSMSRGAKTYSSVFWNGIFHSGIYTWLGYYFSVK---YILG 245

Query: 248 HTQIGLFGLA-GATGALGAAHAGRLADQ---------GLAQWTSGTALLLMLLSWV--AI 295
              IGL  L  G  G L  +  GR AD+         GL      TALL   +S +  AI
Sbjct: 246 EIGIGLAILGYGVPGFLFGSSIGRAADRWGRFRLIIPGLGIAALATALLATNISVILAAI 305

Query: 296 GFTQSSL 302
             T  SL
Sbjct: 306 AVTVISL 312