Pairwise Alignments

Query, 544 a.a., AMP-binding protein from Pseudomonas simiae WCS417

Subject, 560 a.a., putative Long-chain-fatty-acid-CoA ligase from Pseudomonas putida KT2440

 Score =  829 bits (2141), Expect = 0.0
 Identities = 408/559 (72%), Positives = 456/559 (81%), Gaps = 18/559 (3%)

Query: 1   MDQPNQSYSRGSQDKTLLAMTIGQAFDRTVAQFPDGEALVVRHQQRRYTWRQLAETVDLH 60
           M QP  SY+RG QD+ LL  TIGQAFD TVA+  D EALV RHQ  RY+WRQLAE V+++
Sbjct: 1   MSQP--SYTRGRQDRPLLTQTIGQAFDATVARCCDSEALVSRHQGLRYSWRQLAEQVEIY 58

Query: 61  ARAFLALGMQTGDRLGIWAPNCAEWCISQIASAKLGVILVNINPAYRSSELEYVLKQSGC 120
           ARA +ALG+ TGDR+GIW+PNCA+WCI Q+ASAK+G ILVNINPAYR  ELEYVL+QSGC
Sbjct: 59  ARALIALGVNTGDRVGIWSPNCAQWCILQLASAKVGAILVNINPAYRVGELEYVLRQSGC 118

Query: 121 QWLVCAGSFKTSDYHAMLQALNPDL----------------RGMISLDPSPPPGFLPWAQ 164
           +WLVCA +FKTSDYH M+Q L P+L                RG+ISL  +PP GFLPW  
Sbjct: 119 RWLVCAEAFKTSDYHTMVQELVPELASAAPGELASECLPELRGVISLAANPPAGFLPWHA 178

Query: 165 LAALGTGIPLEQLHSRQTSLHFDQAVNIQYTSGTTGFPKGATLSHHNILNNGYMVGESLG 224
            A       +E   +RQ SL FDQ VNIQYTSGTTG PKGATLSH+NILNNG+MVGESLG
Sbjct: 179 FAERAGQTSVEACTARQQSLQFDQPVNIQYTSGTTGAPKGATLSHYNILNNGFMVGESLG 238

Query: 225 LTAQDRLVIPVPLYHCFGMVMGNLGCITHGTTMIYPNDGFDPLLTLTAVAEEHATGLYGV 284
           LTA+DR+VIPVPLYHCFGMVM NLGCITHG+TMIYPND FD  LTL AVAEE AT LYGV
Sbjct: 239 LTARDRMVIPVPLYHCFGMVMANLGCITHGSTMIYPNDAFDAELTLRAVAEERATILYGV 298

Query: 285 PTMFIAMLDHPQLGGFDLSSLRTGIMAGATCPIEVMRRVISEMHMSEVQIAYGMTETSPV 344
           PTMFIAMLDHP     DLS+LR+GIMAGATCPIEVMRRVI +MHM+EVQIAYGMTETSPV
Sbjct: 299 PTMFIAMLDHPSRAHMDLSTLRSGIMAGATCPIEVMRRVIDQMHMAEVQIAYGMTETSPV 358

Query: 345 SLQTGADDDLERRVTTVGRTQPQLENKIIDADGNTVARGEIGELCTRGYSVMLGYWNNPD 404
           SLQTG DDDLE RVTTVGRTQPQLENK++DADG  V RGEIGELCTRGYSVMLGYW+NP 
Sbjct: 359 SLQTGPDDDLELRVTTVGRTQPQLENKLVDADGCIVPRGEIGELCTRGYSVMLGYWDNPQ 418

Query: 405 ATREAIDDAGWMHTGDLASMDAHGYVCIAGRNKDMIIRGGENVYPRELEEFFFTHPAVAD 464
           AT +AID AGWMH+GDLA MD  GYV I GRNKDMIIRGGEN+YPRELEEFF+THPAVAD
Sbjct: 419 ATADAIDPAGWMHSGDLAVMDEQGYVRIVGRNKDMIIRGGENIYPRELEEFFYTHPAVAD 478

Query: 465 VQVIGIPDERYGEAIVAWVKFHPGHVANELELQTWCKGRIAHFKTPKHFKFVEEFPMTVT 524
            QVIGIP  RYGE IVAW+K HPGH A   ELQ WCK RIAHFK P++ +FV+E+PMTVT
Sbjct: 479 AQVIGIPCSRYGEEIVAWIKLHPGHSATVEELQGWCKARIAHFKVPRYIRFVDEYPMTVT 538

Query: 525 GKIQKFRMREISIQELKNA 543
           GK+QKFRMREIS+ E+  A
Sbjct: 539 GKVQKFRMREISVAEIAAA 557