Pairwise Alignments

Query, 311 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 298 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

 Score =  163 bits (412), Expect = 5e-45
 Identities = 104/300 (34%), Positives = 151/300 (50%), Gaps = 13/300 (4%)

Query: 3   LSKVDLNLFIVFDAIYTEANLTRAGQIVGITQPAVSNALARLRETFNDPLFVRTAQGMVP 62
           +SK+DL    VFD +Y   N+++A + +G+ Q A S AL +LR  F+D LF RTAQGM P
Sbjct: 1   MSKLDLEWLAVFDEVYKTGNVSKAAERLGMAQAAASTALNKLRAHFDDRLFTRTAQGMQP 60

Query: 63  TPMAQNIIGPVRNALSLLRVSVQESRIFNPQQAAKTYRISMTDLTEAVILPLLFQRLRRL 122
           TP A+ I   +R AL+ L  +      F+P QA + +RI MTD++E V+LP L   LR  
Sbjct: 61  TPHAERIYPNLREALAQLAQAQGNRSSFDPAQAQRRFRICMTDISEVVLLPGLLDHLRHA 120

Query: 123 APTVVIE----SFLSKRRETTKELAAGRLDFAVDAPLNTDPQVRHVKLMEDRYVCAMRKG 178
           AP V IE    S LS RR     L  G +D AV      D       L    +VC   + 
Sbjct: 121 APGVHIETEIISTLSGRR-----LQDGEVDLAVGFMPQLDAGFYQQTLFMQNFVCLAAQN 175

Query: 179 HPLAGKDKLTLDDYLGLTHIHISSRRNGLGHVDLALGKMGLQRKIALRSQHYLMASQVLQ 238
           HP  G  +LT   +    H  +S+   G   VD  L ++GL+R + +R   +L  ++++ 
Sbjct: 176 HPRIGA-RLTRKRFEAEAHAVVSTSGTGHAIVDTTLARLGLKRNVVVRLSSFLSVARIVA 234

Query: 239 QTDMVMTVPE---RFARRHELHWFNLPVNDVPPVETHLYWHESTDQDPANRWMREQMIEL 295
            T++++ VP    R     E      P   +P      +WHE    DP N W+R  + +L
Sbjct: 235 HTELLVVVPRILGRVLATQEPVKLLEPPFALPDYAVKQHWHERFHADPGNAWLRRTLAQL 294