Pairwise Alignments

Query, 311 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 299 a.a., CnmA from Pseudomonas putida KT2440

 Score =  136 bits (342), Expect = 7e-37
 Identities = 94/292 (32%), Positives = 141/292 (48%), Gaps = 8/292 (2%)

Query: 10  LFIVFDAIYTEANLTRAGQIVGITQPAVSNALARLRETFNDPLFVRTAQGMVPTPMAQNI 69
           L  +FD +Y   ++TRA + +G +QP +S  LARLRE  NDPLFVRT  GM PTP A  +
Sbjct: 12  LLQLFDVLYQCRSVTRAAEQLGQSQPTISIWLARLREQLNDPLFVRTPGGMAPTPRADQL 71

Query: 70  IGPVRNALSLLRVSVQESRIFNPQQAAKTYRISMTDLTEAVILPLLFQRLRRLAPTVVIE 129
           IGP R  L  LR        F    A + +R+ ++D +   +LP +   LR  AP + +E
Sbjct: 72  IGPCREVLESLRRLTAWEPQFIAATAQRRFRLCVSDASHITLLPSILNHLRSHAPGIRLE 131

Query: 130 SFLSKRRETTKELAAGRLDFAVDAPLNTDPQVRHVKLMEDRYVCAMRKGHPLAGKDKLTL 189
           +       T   L +G  D A+         +    L E  +VC     HP  G D ++L
Sbjct: 132 A-ARIDGNTESALESGEADLAIGFVPWLGGGMYQQVLFEQDWVCLSNPQHPRLG-DGMSL 189

Query: 190 DDYLGLTHIHISSRRNGLGHVDLALGKMGLQRKIALRSQHYLMASQVLQQTDMVMTVP-- 247
           + Y    H+ IS    G   ++  L + G++R+I L    +L   +++  TD++ T+P  
Sbjct: 190 ERYRAEGHVQISF-GTGQKLLEAGLARAGIERRIMLELPAFLGLGKIIGTTDLLGTLPRH 248

Query: 248 --ERFARRHELHWFNLPVNDVPPVETHLYWHESTDQDPANRWMREQMIELCQ 297
             +  A  H L   + P  +V       +WH    QD  NRW+RE +  L Q
Sbjct: 249 IGQTLADMHGLQVHDCPF-EVEGFTVKQHWHARYHQDNGNRWLREVVRGLFQ 299