Pairwise Alignments

Query, 311 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 316 a.a., LysR family transcriptional regulator from Agrobacterium fabrum C58

 Score =  153 bits (387), Expect = 4e-42
 Identities = 98/304 (32%), Positives = 154/304 (50%), Gaps = 16/304 (5%)

Query: 3   LSKVDLNLFIVFDAIYTEANLTRAGQIVGITQPAVSNALARLRETFNDPLFVRTAQGMVP 62
           L  VDLNL  V  A+  + N+T AG+ +G++QPA+S+AL R+R    D LF +T++G V 
Sbjct: 6   LGSVDLNLLKVIYALVVKGNMTAAGEYIGLSQPAMSHALKRVRAITGDELFKKTSRGFVM 65

Query: 63  TPMAQNIIGPVRNALSLLRVSVQESRIFNPQQAAKTYRISMTDLTEAVILPLLFQRLRRL 122
           T     I   VR  +      + +   F+P  + + +RI M D    V++P L +R+R  
Sbjct: 66  TRFCTEIFPAVRRIIEDTETVMLQRLAFDPATSHRAFRIGMNDYFSVVLMPRLVERVRSE 125

Query: 123 APTVVIE------SFLSKRRE----TTKELAAGRLDFAVDAPLNTDPQVRHVKLMEDRYV 172
           A   V+E      + +S  R+      + L  G +D AV    N   + R   L  +R V
Sbjct: 126 AEHCVLEVIHMPRTGISHNRDFMPVVQEHLNEGTIDVAVMTAENFPARYRCASLFTERRV 185

Query: 173 CAMRKGHPLAGKDKLTLDDYLGLTHIHISSRRNGLGHVDLALGKMGLQRKIALRSQHYLM 232
           C M   +P A K+ LTLD  L L H+ ++S  +  G +D  L  MGL+R++     H+  
Sbjct: 186 CIMSANNP-AAKEPLTLDALLSLGHVKVTSSPSRRGWIDERLDAMGLERRVVAVVPHFSA 244

Query: 233 ASQVLQQTDMVMTVPER----FARRHELHWFNLPVNDVPPVETHLYWHESTDQDPANRWM 288
           A  ++ ++D+V  +PE     F R HEL     P  +     T + W    ++DPA+ W+
Sbjct: 245 AVAIVSRSDLVAMMPESVAKLFERSHELLLLESPFEE-EKQSTSMIWLAEKERDPASLWL 303

Query: 289 REQM 292
           REQ+
Sbjct: 304 REQI 307