Pairwise Alignments

Query, 409 a.a., acyl-CoA dehydrogenase from Pseudomonas simiae WCS417

Subject, 384 a.a., Branched-chain acyl-CoA dehydrogenase (EC 1.3.99.12) from Variovorax sp. SCN45

 Score =  147 bits (372), Expect = 4e-40
 Identities = 121/385 (31%), Positives = 178/385 (46%), Gaps = 16/385 (4%)

Query: 11  ELRERVTAFMDAYVYPAEPVFERQVSEGDRWQPTVIMEELKAKAKAEGLWNLFLPESELG 70
           EL E   AF       A+  F    ++ D        +E  AKA   G   L+ PE   G
Sbjct: 4   ELSEEQNAFAQTARDFAQAEFAPHAAQWDA--EAFFPKEAIAKAGELGFCGLYAPERIGG 61

Query: 71  AGLTNLEYAPLAEIMGRSLLGPEPFNCSAPDTGNME--VLVRYANEEQKQRWLEPLLRGE 128
            GL  L+ A + E M       +P   +     NM   +L  +A +   Q+W E L  G 
Sbjct: 62  LGLPRLDSALVFEEMA----AVDPSTTAFITIHNMATWMLGTWATDAVAQQWGEELTSGR 117

Query: 129 IRSAFAMTEPDVASSDATNMAARAERQGDEWVINGKKWWTSGACDPRCKILIFMGLSNPD 188
             +++ +TEP  A SDA ++  RAE QG E+VING K + SGA      +L    ++   
Sbjct: 118 KLASYCLTEPG-AGSDAGSLKTRAELQGAEYVINGGKAFISGAGSTDVLVL----MARTG 172

Query: 189 APRHQQHSMILVPVDTPGVKIVRPLPVFGYDDAPHGHAEVLFDNVRVPYENVLLGEGRGF 248
                  S   VP D PG+   +     G++  P     + FDNVR+P +N+L  EG GF
Sbjct: 173 GAGASGISAFAVPADAPGISYGKKEHKMGWNSQPT--RTINFDNVRIPAQNLLGKEGEGF 230

Query: 249 EIAQGRLGPGRIHHCMRSIGMAERALELMCKRSVSRTAFGKPLARLGGNIDKIADSRMEI 308
            IA   L  GRI+    S+G A+ AL+   +    R  FGKPLA       K+AD   E+
Sbjct: 231 RIAMKGLDGGRINIATCSVGAAQGALDAARRYLHERQQFGKPLASFQALQFKLADMATEL 290

Query: 309 DMARLLTLKAAYMMDTVGNKVAKSEIAQIKVVAPNVALKVIDRAIQIHGGAGVSNDFPLA 368
             AR +   AA  +D  G+  A +  A  K  A +    V + A+Q+HGG G  ++FPL 
Sbjct: 291 VAARQMVRLAASKLD-AGHADASTYCAMAKRFATDAGFNVCNDALQLHGGYGYLSEFPLE 349

Query: 369 YMYAMQRTLRLADGPDEVHRAAIGK 393
            +    R  ++ +G +E+ R  + +
Sbjct: 350 RLVRDARVHQILEGTNEIMRVIVAR 374