Pairwise Alignments

Query, 270 a.a., exonuclease III from Pseudomonas simiae WCS417

Subject, 258 a.a., exodeoxyribonuclease III from Magnetospirillum magneticum AMB-1

 Score =  144 bits (362), Expect = 2e-39
 Identities = 88/269 (32%), Positives = 135/269 (50%), Gaps = 14/269 (5%)

Query: 1   MKIVSFNINGLRARPHQLAALIEKHQPDVIGLQETKVHDDQFPLAEVQALGYHVYYHGQK 60
           ++I ++N+N +RAR   +   +    PDV+ LQE K  D  FPL E+QA GYH   HGQK
Sbjct: 3   LRIATWNVNSVRARLGNVLDWLGSFAPDVVLLQEIKCQDQDFPLLEIQAAGYHAAVHGQK 62

Query: 61  GHYGVALLSRQPALSLHKGFASDEEDAQRRFIWGTFADENGHPVTIMNGYFPQGESRDHP 120
            + GVA+LSR P   +    + D+ D Q R+I  T        + + NG    G+  D+ 
Sbjct: 63  SYNGVAILSRHPMSDVRTRLSGDDSDEQARYIEATIGGWRLASLYLPNGNPAPGDKFDYK 122

Query: 121 TKFPAKQRFYEDLQQLLESQFSNDQALVVMGDINISPEDIDIGIGADNAKRWLKTGKCSF 180
             + A+ R +       ++  +     V+ GD NI P D D+     +  +W     C  
Sbjct: 123 LAWMARLRTH------AQALLAQGIPFVLGGDFNICPTDDDV----YDPPKWRDDALCR- 171

Query: 181 LPEEREWMARLKNWGLVDSFRHLNPDVADRFSWFDYRSRGFEDEPKRGLRIDVILASNGL 240
            P+ R     + N GL ++FR L+P    R+S++DY++  ++ +   GLRID  L S   
Sbjct: 172 -PDSRAAWRSIVNLGLTEAFRALHPGEKGRYSFWDYQAGAWQRD--EGLRIDHFLLSPQA 228

Query: 241 LSRVKDAGVDYELRGLEKPSDHAPIWLEL 269
              +    +D   RG EK SDH P+W+EL
Sbjct: 229 ADCLHACEIDKAPRGKEKASDHTPVWIEL 257