Pairwise Alignments

Query, 270 a.a., exonuclease III from Pseudomonas simiae WCS417

Subject, 265 a.a., exonuclease III from Agrobacterium fabrum C58

 Score =  171 bits (434), Expect = 1e-47
 Identities = 97/266 (36%), Positives = 150/266 (56%), Gaps = 12/266 (4%)

Query: 1   MKIVSFNINGLRARPHQLAALIEKHQPDVIGLQETKVHDDQFPLAEVQALGYHVYYHGQK 60
           MKI ++NING++AR   L   ++   PD++ LQE K  D+ FP  E++ALGYH+  HGQK
Sbjct: 1   MKIATWNINGVKARIENLCQWLKDSSPDIVCLQEIKSVDEGFPRLEIEALGYHIETHGQK 60

Query: 61  GHYGVALLSRQPALSLHKGFASDEEDAQRRFIWGTFADENGHPVTIMNGYFPQGESRDHP 120
           G  GVALLS+     +++G   D+ D Q RFI G F+ E G  + + + Y P G   D P
Sbjct: 61  GFNGVALLSKVKPDEVNRGLPGDDADEQARFIEGVFSVEGG-AIRVCSLYLPNGNPPDDP 119

Query: 121 TKFPAKQRFYEDLQQLLESQFSNDQALVVMGDINISPEDIDIGIGADNAKRWLKTGKCSF 180
            K+P K  + E L++  E + + ++ L++ GD N+ PE  D      + + W   G   F
Sbjct: 120 VKYPYKLAWMERLRRFAEDRLAMEEPLILAGDYNVIPEPFD----CHDPRVW--EGDALF 173

Query: 181 LPEEREWMARLKNWGLVDSFRHLNPDVADRFSWFDYRSRGFEDEPK-RGLRIDVILASNG 239
           LP+ R    +L+N G  D+ R    D A  +S++DY++  +   PK  G+RID ++ S  
Sbjct: 174 LPKTRAAFRKLENLGFTDAAR-ATTDAAGLYSFWDYQAGAW---PKNNGIRIDHLMLSAE 229

Query: 240 LLSRVKDAGVDYELRGLEKPSDHAPI 265
              R++   ++  +R  EKPSDH P+
Sbjct: 230 AADRLQSVEIEKHVRAWEKPSDHVPV 255