Pairwise Alignments

Query, 575 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 645 a.a., Outer membrane component of TAM transport system from Variovorax sp. SCN45

 Score =  163 bits (412), Expect = 2e-44
 Identities = 147/567 (25%), Positives = 229/567 (40%), Gaps = 38/567 (6%)

Query: 35  DALKANIEGYIGGVGDRDEEALLRFSR---GAEEQARKAAQALGFYQPRIESDV----KG 87
           D LK ++E  I    + D+      SR    AE  AR+    LG++ P +  ++    +G
Sbjct: 85  DYLKLHLE--IQRYRELDDLGATEISRLMVAAEANARELLGTLGYFTPTLTLELNETPQG 142

Query: 88  GNNPR-LILTIDPGEPVHLRNVTIRVDGPAAD-----LKAFRVPVSNDLKSGAVLNHGHY 141
              PR +++T+ PGE   + NV I   GP AD      +   +  +  L++G       +
Sbjct: 143 AKAPREIVITVSPGELTKVSNVQISYGGPIADDATAEAQRDSIRTAWALRAGQPFTQQAW 202

Query: 142 EDAKRLIQNQASRYGFFSGRFTRQKLAVDPQAGVADIELIYDSGPRYTLGKVSFAGDTPF 201
           ++AK       +   F +G     +  VD     A + + Y SGP Y  G +   G   +
Sbjct: 203 DEAKTTALRSLTAKRFPTGNIEISRAEVDADRHEARLSVTYQSGPAYKFGPLVLRGIQRY 262

Query: 202 DEELLHRMVPFKSGTPYDSELIAELNQNLQASGFFEGVRVDAAPAASTNDIIPVAVRLET 261
           D +   R+    SG  YD + + +  Q L +SG+++ V +     +      PV  +L  
Sbjct: 263 DPDGARRIARLPSGQDYDQQKLLDAQQRLASSGYYDSVFLTLDTESGNPLAAPVIAQLRE 322

Query: 262 RKPRTMGLGLGFSTDVGPRGKANWTRHWVNPQGHSYGWEA--ELSAPRQNVGLWYDIPLD 319
              + + LG GF+TD GPR   +     ++ Q    GW A   LS  R    L  ++   
Sbjct: 323 APLQKVVLGAGFTTDNGPRLSVD----HIHNQVPLLGWRAVSRLSVDRDIKSLSTELNAI 378

Query: 320 PPLTDKLRFAGGYQNEEIANTDTVSKLLTLGPEWHSKLPSGWTRVISLKYQREEYRLGND 379
           P       F+G     E + +  V      G    +K      R   L+Y   + R  N 
Sbjct: 379 PDDHGWRWFSGAELKSEQSGSYVVDSGRLRG--GRNKSSDHIDRSYFLQYDYAQNRGTNA 436

Query: 380 SGLSNLVMPGVSYSYLRSDNRIDPHNGYRLQFDTKVAKEGLGSDTNLLYGTALVKGLTTL 439
              ++ V     ++    DN   P  G+ +  +        G  T      A   G+  L
Sbjct: 437 PPSASAVTANWGWTGRYFDNNSAPSRGFGIALEVAAGYTLTGMQTPFTRTYARWLGVLPL 496

Query: 440 WDN---------HRFLARAQVGGSATNGYKSVPPSLRFFAGGDQSVRGYEYQTLSPENDR 490
             +          R   R + G  A      +P +L F  GGD +VRGY Y+ +      
Sbjct: 497 GSSDDKETNARRSRLQLRLEGGAVAAKDSAQIPSTLMFLTGGDTTVRGYSYKQIGTVRPD 556

Query: 491 GDRVGGRYMVALSAEYQYSIA-----EKWRIATFIDQGNSFNNLDLPSLKTGVGVGIRWV 545
           G  V GRY+   S E+Q  +        W    F+D G   +       K GVGVG RW 
Sbjct: 557 GTTVAGRYLGVASVEWQRPVVYNNKLTDWESVVFVDAGAVADKPAELKPKVGVGVGARWR 616

Query: 546 SPVGPIRLDLAHALEDPGGIRLHFSMG 572
           SPVGP++ DLA+ + D    RLHF +G
Sbjct: 617 SPVGPVQADLAYGV-DSKRFRLHFRLG 642