Pairwise Alignments

Query, 575 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 787 a.a., outer membrane protein assembly factor from Pseudomonas putida KT2440

 Score = 56.2 bits (134), Expect = 5e-12
 Identities = 45/156 (28%), Positives = 68/156 (43%), Gaps = 40/156 (25%)

Query: 457 NGYKS---VPPSLRFFAGGDQSVRGYEYQTLSPEN----------------DRG-DRVGG 496
           NGY S   +P    + AGG  SVRG++  TL P +                DR  D +GG
Sbjct: 629 NGYGSTDGLPFYESYNAGGQGSVRGFKDGTLGPRSTPATGAYSNAGQAYYSDRDTDVLGG 688

Query: 497 RYMVALSAEYQYSIA-----EKWRIATFIDQGNSF------------NNLDLPSLKTGVG 539
             ++   AEY + +       + R + F+D GN +             ++DL  +   +G
Sbjct: 689 NILITGGAEYLFPLPFVKDQSQLRSSVFVDAGNVYADTCYLSTTQGCGSVDLAQMAVSLG 748

Query: 540 VGIRWVSPVGPIRLDLAHALEDPGGIR---LHFSMG 572
           VG+ W SP+GP+   LA  L+ P         FS+G
Sbjct: 749 VGVTWYSPMGPLSFSLAAPLKKPDNAETQVFQFSLG 784



 Score = 48.9 bits (115), Expect = 8e-10
 Identities = 43/188 (22%), Positives = 79/188 (42%), Gaps = 8/188 (4%)

Query: 93  LILTIDPGEPVHLRNVTIRVDGPAADLKAFRVPVSNDL--KSGAVLNHGHYEDAKRLIQN 150
           + + I+ GE   +R+V +     + DLK     V + L  + G V +         LI  
Sbjct: 255 ITVNINEGEKYTVRDVKL-----SGDLKVPEDQVKSLLLVQPGQVFSRKVMTTTSELITR 309

Query: 151 QASRYGFFSGRFTRQKLAVDPQAGVADIELIYDSGPRYTLGKVSFAGDTPFDEELLHRMV 210
           +    G+            D Q    DI  + D G R  + ++++ G+T  ++E+L R +
Sbjct: 310 RLGNEGYTFANVNGVPQPND-QDHTVDIMFVVDPGKRAYVNRINYRGNTKTEDEVLRREM 368

Query: 211 PFKSGTPYDSELIAELNQNLQASGFFEGVRVDAAPAASTNDIIPVAVRLETRKPRTMGLG 270
               G    + LI +    L+  GFF+ V V+      T+D + V   +E +   ++   
Sbjct: 369 RQMEGGWASTYLIDQSKTRLERLGFFKEVNVETPQVPGTDDQVDVNYSVEEQASGSITAS 428

Query: 271 LGFSTDVG 278
           +GF+   G
Sbjct: 429 VGFAQSAG 436