Pairwise Alignments

Query, 575 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 755 a.a., outer membrane protein assembly factor BamA from Magnetospirillum magneticum AMB-1

 Score = 94.0 bits (232), Expect = 2e-23
 Identities = 122/501 (24%), Positives = 212/501 (42%), Gaps = 59/501 (11%)

Query: 96  TIDPGEPVHLRNVTIRVDGPAADLKAFRVPVSNDLKSGAVLNHGHYEDAKRLIQNQASRY 155
           TID GE     +  I  +    DLK   +      ++G   N    ED   ++Q      
Sbjct: 258 TIDEGERYKFGSSVINAE--LRDLKPEDLQPLLISETGGWYNADQVED---IVQRLTDAV 312

Query: 156 GFFSGRFTRQKLAVDPQAGVADIELIYD--SGPRYTLGKVSFAGDTPFDEELLHRMVPFK 213
           G     F   K  V        I++ Y+   GPR  + ++  +G+    ++++ R     
Sbjct: 313 GTKGYAFVDVKPQVQRNRETHTIDITYEIKEGPRVFVERIDISGNVRTLDQVIRREFRLV 372

Query: 214 SGTPYDSELIAELNQNLQASGFFEGVRVDAAPAASTNDIIPVAVRLETRKPRTMGLGLGF 273
            G  ++S  +    Q L+   FFE   V   P+ +  D   + V ++ +    +  G+G+
Sbjct: 373 EGDAFNSAKLRRSRQRLKDLNFFEKAEVTNIPSDTAPDRTIIKVDVQEKSTGELMFGVGW 432

Query: 274 STDVGPRGKANWTRHWVNPQGHSYGWEAELSAPRQNVGLWYDIPLDPPLTDKLRFAG--G 331
           ++  GP  +A+     +  +G      A L   R ++ L +    +P   D+   AG   
Sbjct: 433 ASSAGPIIEASLRERNLLGRGQDLRLGAGLGTKRSSLDLSFT---EPYFMDREVAAGFDA 489

Query: 332 YQNEEIANTDTVSKLLTLGPEWHSKLPSGWTRVISLKYQREEYRLGNDS--GLSNLV--- 386
           +  +     ++     ++G +    L +G+    SL+ Q   Y L  D+  G+S+     
Sbjct: 490 FVIDRKLQKESSYDASSIGGD----LRAGYRLSESLR-QDVIYTLKQDTVKGISSTSPYV 544

Query: 387 ----------MPGVSYSYLRSDNRIDPHNGYRLQFDTKVAKEGLGSDTNLLYGTALVKGL 436
                     + G S  Y R D+R+DP  GY ++  T  A  GLG D   L GT      
Sbjct: 545 LEQIGSKVSSVIGQSLMYDRRDSRLDPTEGYFIKLGTDGA--GLGGDIRYLRGTLTGGQY 602

Query: 437 TTLWDNHRFLARAQVGGSATNGY-----KSVPPSLRFFAGGDQSVRGYEYQTLSP-ENDR 490
            TL D      +  +G S++ GY     + V  + RFF GGD ++RG+    +SP + + 
Sbjct: 603 FTLTD------KVILGVSSSVGYIYGLDQRVRITDRFFVGGD-NLRGFANGGVSPRDKNT 655

Query: 491 GDRVGGRYMVALSAEYQYSIA--EKWRIA--TFIDQG--NSFNNLDLP------SLKTGV 538
           GD +GG +    SA+ ++ +   E++ ++   F D G     +  D        S++   
Sbjct: 656 GDALGGIWQAVGSAQVKFPLGLPEEFGVSGQAFTDIGAVGETDTADTAAVQQSSSVRVSP 715

Query: 539 GVGIRWVSPVGPIRLDLAHAL 559
           GVGI W SP+GP+ +DL + L
Sbjct: 716 GVGISWKSPMGPVSVDLGYPL 736