Pairwise Alignments

Query, 575 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 577 a.a., predicted outer membrane protein and surface antigen (NCBI) from Escherichia coli BW25113

 Score =  325 bits (832), Expect = 4e-93
 Identities = 193/573 (33%), Positives = 300/573 (52%), Gaps = 14/573 (2%)

Query: 12  ILLFTSCGALAQSELDVRVKPSNDALKANIEGYIGGVGDRDEEALLRFSRGAEEQARKAA 71
           + L    G+   + + ++V+  +  L+ N+   +  +   +     RF    ++  R+  
Sbjct: 10  VSLLCLSGSAVAANVRLQVEGLSGQLEKNVRAQLSTIESDEVTPDRRFRARVDDAIREGL 69

Query: 72  QALGFYQPRIESDVKGG---NNPRLILTIDPGEPVHLRNVTIRVDGPAADLKAFRVPVSN 128
           +ALG+YQP IE D++         LI  + PG PV +    + + G A   K +   +  
Sbjct: 70  KALGYYQPTIEFDLRPPPKKGRQVLIAKVTPGVPVLIGGTDVVLRGGARTDKDYLKLLDT 129

Query: 129 DLKSGAVLNHGHYEDAKRLIQNQASRYGFFSGRFTRQKLAVDPQAGVADIELIYDSGPRY 188
               G VLN G YE+ K+ + + A R G+F   FT+ +L +      A  ++ Y+SG RY
Sbjct: 130 RPAIGTVLNQGDYENFKKSLTSIALRKGYFDSEFTKAQLGIALGLHKAFWDIDYNSGERY 189

Query: 189 TLGKVSFAGDTPFDEELLHRMVPFKSGTPYDSELIAELNQNLQASGFFEGVRVDAAPA-- 246
             G V+F G +   +E L  +VPFK G  Y+S+ +AELN+ L A+G+F  V V  AP   
Sbjct: 190 RFGHVTFEG-SQIRDEYLQNLVPFKEGDEYESKDLAELNRRLSATGWFNSVVV--APQFD 246

Query: 247 -ASTNDIIPVAVRLETRKPRTMGLGLGFSTDVGPRGKANWTRHWVNPQGHSYGWEAELSA 305
            A    ++P+   +  R   T+  G+G+STDVGPR KA W + W+N  GHS      +SA
Sbjct: 247 KARETKVLPLTGVVSPRTENTIETGVGYSTDVGPRVKATWKKPWMNSYGHSLTTSTSISA 306

Query: 306 PRQNVGLWYDIPL-DPPLTDKLRFAGGYQNEEIANTDTVSKLLTLGPEWHSKLPSGWTRV 364
           P Q +   Y +PL   PL       GG++  ++ +T++ S  L     W   L SGW R 
Sbjct: 307 PEQTLDFSYKMPLLKNPLEQYYLVQGGFKRTDLNDTESDSTTLVASRYWD--LSSGWQRA 364

Query: 365 ISLKYQREEYRLGNDSGLSNLVMPGVSYSYLRSDNRIDPHNGYRLQFDTKVAKEGLGSDT 424
           I+L++  + +  G  +  + L  PGV  S  RS   + P  G   ++    +    GSD 
Sbjct: 365 INLRWSLDHFTQGEITNTTMLFYPGVMISRTRSRGGLMPTWGDSQRYSIDYSNTAWGSDV 424

Query: 425 NLLYGTALVKGLTTLWDNHRFLARAQVGGSATNGYKSVPPSLRFFAGGDQSVRGYEYQTL 484
           +     A    + TL+D HRF+ R  +G   T  +  VPP LRFFAGGD+S+RGY+Y+++
Sbjct: 425 DFSVFQAQNVWIRTLYDRHRFVTRGTLGWIETGDFDKVPPDLRFFAGGDRSIRGYKYKSI 484

Query: 485 SPENDRGDRVGGRYMVALSAEYQYSIAEKWRIATFIDQGNSFNNLDLPSLKTGVGVGIRW 544
           +P+   GD  G   ++  S EYQY++  KW  A F+D G + +++     KTG GVG+RW
Sbjct: 485 APKYANGDLKGASKLITGSLEYQYNVTGKWWGAVFVDSGEAVSDIRRSDFKTGTGVGVRW 544

Query: 545 VSPVGPIRLDLA--HALEDPGGIRLHFSMGPEL 575
            SPVGPI+LD A   A +D  G++ +  +GPEL
Sbjct: 545 ESPVGPIKLDFAVPVADKDEHGLQFYIGLGPEL 577