Pairwise Alignments

Query, 575 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 641 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score =  142 bits (359), Expect = 3e-38
 Identities = 118/491 (24%), Positives = 208/491 (42%), Gaps = 33/491 (6%)

Query: 93  LILTIDPGEPVHLRNVTIRVDGPAADLKAFRVPVSNDLKSGAVLNHGHYEDAKRLIQNQA 152
           +++T+ PG    L NV +  D    +L  + +    D  S A++  G+     +LI +  
Sbjct: 151 MVITVTPGPKFTLGNVRLEGDVTGRNLDEYGLIAGGDAGSLAIIRAGN-----KLIDDLK 205

Query: 153 SRYGFFSGRFTRQKLAVDPQAGVADIELIYDSGPRYTLGKVSFAGDTPFDEELLHRMVPF 212
           +  G    + T+++   +      DI +  + GP   LG V+  G+   D + + R    
Sbjct: 206 AE-GRPLAKLTKREAVANHATNTVDITMAAEGGPVAPLGAVTVTGEKTVDGDFIRRYSRL 264

Query: 213 KSGTPYDSELIAELNQNLQASGFFEGVRVDAAPAASTNDIIPVAVRLETRKPRTMGLGLG 272
             G PY  E + +    L+  G F  + +  A   + +  IP+ + +   K R  G+G  
Sbjct: 265 NGGEPYSPEKLRKAADRLRQLGVFSSLTIKEAGTLARDGTIPLTIEVSEGKHRYFGVGAQ 324

Query: 273 FSTDVGPRGKANWTRHWVNPQGHSYGWEAELSAPRQ---------NVGLWYDIP--LDPP 321
           +ST  G   +  W    +  Q  S   E  +S   +         + G+ +  P   +P 
Sbjct: 325 YSTTEGIGLQGYWGHRNLFGQAESLRIEGSVSRIAEASSVEGMDYSAGITFTKPGMFNPR 384

Query: 322 LTDKLRFAGGYQNEEIANTDTVSKLLTLGPEWHSKLPSGWTRVISLKYQREEYRLGNDSG 381
            T K       +N +     T++   T G  +           + +++   E   G +  
Sbjct: 385 TTFKTSLIAKTENPDTYRAKTLTG--TAGFAYELNDTDTAAAGLEVQWADTEDAFGKNEY 442

Query: 382 LSNLVMPGVSYSYLRS--DNRIDPHNGYRLQFDTKVAKEGL-GSDTNLLYGTALVKGLTT 438
           L+      +   ++R   D++++P  G+R     K + E L G+  +   G+  + G   
Sbjct: 443 LTT----SIPLEFVRDTRDDKLNPTEGFRASLAAKPSYEALNGTFFSSFEGS--ITGYKG 496

Query: 439 LWDNHRFLARAQVGGSATNG---YKSVPPSLRFFAGGDQSVRGYEYQTLSPENDRGDRVG 495
           L    R +   ++ G    G    + +P + RFFAGG  SVRGY YQ +SP N  GD  G
Sbjct: 497 LGAEDRLIMAGKLSGGVLVGGSDLQDIPTTRRFFAGGGGSVRGYSYQEISPYNAAGDATG 556

Query: 496 GRYMVALSAEYQYSIAEKWRIATFIDQGNSFNNL--DLPSLKTGVGVGIRWVSPVGPIRL 553
           GR  V  S E +  + +   +  F D G   + +  D   ++ G G+G+R+ +P GP+RL
Sbjct: 557 GRSYVVGSVEARIKVTDTIGLVPFFDAGVVSDGVTPDFSDIRAGAGIGLRYATPFGPLRL 616

Query: 554 DLAHALEDPGG 564
           D+A  LE   G
Sbjct: 617 DVAMPLEKYDG 627