Pairwise Alignments

Query, 828 a.a., fimbrial protein from Pseudomonas simiae WCS417

Subject, 853 a.a., P pilus assembly protein, porin PapC from Enterobacter asburiae PDN3

 Score =  474 bits (1220), Expect = e-138
 Identities = 299/828 (36%), Positives = 452/828 (54%), Gaps = 56/828 (6%)

Query: 27  DEHFNTSFLQGAAASV-DLQSLLASSSVLPGNYRVDLYGNDTLVGRRDIDFRRN----PS 81
           + +FN +FL   AASV DL          PG YRVD++ ND  +G +D+ F +     P 
Sbjct: 27  ESYFNPAFLSDDAASVADLSRFEQGHQQAPGVYRVDIWRNDEFIGTQDVHFEQAENTPPV 86

Query: 82  NGRVEACLTLEMLQQVGVDIGALQANGKLVDTDPNACLDLPALIEHASVRYDVPRLRLLV 141
            G + AC+T  ML + GV++ A     +L     + C+ L   I  +   ++    RL V
Sbjct: 87  AGGLSACITRAMLDRFGVNVAAFP---ELAKVQGDTCVPLTTAIPGSETAFNFASQRLDV 143

Query: 142 SVPQRAMERGRRGYVDPALWDDGVPAAFMNYQLSSNRSSNDANTTLSNNLGLRNGINLGG 201
           S+PQ A++   RGY+ P  WD+G+PAA +NY  + NR S D     S  L L++G+N G 
Sbjct: 144 SLPQVALQNSARGYIPPEQWDEGIPAALVNYSFTGNRGSEDD----SYYLNLQSGLNYGA 199

Query: 202 WRLRNES--NFSSSTG-RSSTFKSNRSYLQHDLTALKGQFSAGDIFSDADLFDSVRYRGL 258
           WRLRN     ++ + G R S +++  ++ Q  +  LK +   GD  +  D+FDS+ +RG 
Sbjct: 200 WRLRNNGAWRYTQNNGQRHSEWQNIGTWAQSTVIPLKSELVLGDSNTGNDVFDSMGFRGG 259

Query: 259 KMASDDGMRADSERGYAPIIRGVAQSSATVEIRQNNYILYTANVPPGPFEISDIYPSGSN 318
           ++ S D M  DS +GYAP +RG+A++ A V +RQN Y++Y + V PG F I+D+ P+ S+
Sbjct: 260 RLFSSDSMYPDSLQGYAPTVRGIARTPAKVVVRQNGYVIYQSYVQPGAFAITDLNPTSSS 319

Query: 319 GDLEVTVIEADGRRRVTVQAFSSLPIMVREGQVKYSLSAGQYNSNSDGQKTPQFVSSTLA 378
           GDLEVTV E DG ++     +S++P++ REG+ KY L AG Y S +  Q TP F   TL 
Sbjct: 320 GDLEVTVEEKDGTQQRYTVPYSTVPLLQREGRWKYDLVAGDYRSGNSDQDTPFFTQGTLV 379

Query: 379 YGISSNLSGIVGVQATQDFQALSVGAGRNT-SIGAVSLDMTHSASR-TFGRQVTGNSLRA 436
            G+++  +   G Q    + A++VGAG+N    GAVSLD+TH+ S+     +  G SLR 
Sbjct: 380 TGLANGYTLYGGTQLASRYTAVAVGAGKNLGDWGAVSLDITHARSQLADDSKHEGQSLRF 439

Query: 437 LYAKTFTGTDTNFTLAAYRYSTEGYRTLTEHVEELSSDGRTHLG---------------- 480
           LYAK+  G  TNF L  YRYST+G+ TL + V   S +G  +                  
Sbjct: 440 LYAKSLNGFGTNFQLLGYRYSTKGFYTL-DDVAWRSMEGYQYADSQNDNDVPDVQSYHNL 498

Query: 481 --NSKTRTDLTVNQSLGRNQQFGSVYLNASDQRYWGRGGAQS-LSAGYSNYWRDVTYNLS 537
             N K R  L V+QSLG    +GSVY++ S+Q YWG          GY+   + + Y++S
Sbjct: 499 TWNKKGRFQLNVSQSLG---DYGSVYISGSEQTYWGTDETNLWYQLGYAGGVKGINYSVS 555

Query: 538 ATHTKDVGNYGPSNNDTLINLSLSFPLGSKPRAPR--------AFVSASTQKDNDTT-QM 588
            +  K VG  G ++     N+S+ F L ++    R        A  SAS   D DT+ Q 
Sbjct: 556 WSWNKSVGIDG-TDRIASFNVSVPFSLFTRQGYRRDSAIDRAYATASASRNSDGDTSWQT 614

Query: 589 GVNGYLTEDSNTYYSLQAGNSSTGGSTGSANLSTRTALMDISGGYSQGRGYSAQNLNVAG 648
           GV+G L ED N  YS+  G++ST GS+GSA+ + +     +  GY+  R     N  ++G
Sbjct: 615 GVSGTLLEDRNLNYSVTQGHASTNGSSGSASANWQATYGTLGVGYNYSRDQHDLNWQLSG 674

Query: 649 SVVAHAGGINLGQTVGETFALAQVEGVPGVKISSFSGARTGSNGYAVIPNTQPYRVNWIS 708
            VV HA G+   Q +G+T  L +  G  GV I + +G +T   GYAV+P    YR N ++
Sbjct: 675 GVVGHADGVTFSQPLGDTNVLIKAPGASGVSIENQTGVKTDWRGYAVMPYATVYRYNRVA 734

Query: 709 LDTRDLGADIEIDNATQQVVPRRGAVVLARYASKSGRRVQFALFDAQHRPIPFGASL-ES 767
           LDT  +  + +I+N    VVP +GA+V A + ++ G R    +    ++P+PFGA + E+
Sbjct: 735 LDTNTMSNNTDIENNVSSVVPTKGALVRASFDTRIGVRALLTVMRG-NQPVPFGAVVRET 793

Query: 768 MAGKQMAIADPGGKALALVEEDTGTLVIKWAD---QHCQAPYALGERN 812
            +G    + D G   L+ +  + G L+I+W D     C+APY+L E++
Sbjct: 794 KSGVTSMVGDDGQIYLSGLPLE-GELLIQWGDGAQSQCRAPYSLSEQS 840