Pairwise Alignments

Query, 828 a.a., fimbrial protein from Pseudomonas simiae WCS417

Subject, 818 a.a., P pilus assembly protein, porin PapC from Enterobacter asburiae PDN3

 Score =  431 bits (1107), Expect = e-124
 Identities = 271/793 (34%), Positives = 426/793 (53%), Gaps = 31/793 (3%)

Query: 30  FNTSFLQG---AAASVDLQSLLASSSVLPGNYRVDLYGNDTLVGRRDIDFRRNPSNGRVE 86
           F+ S L+G   A   +DL     S++ LPG Y   +  N+  +   +I +  +P    + 
Sbjct: 13  FSPSSLEGDMLAQQDIDLSLFSKSNAQLPGTYSSRVQVNEHRLSTTNIVYVSSPEGSLIP 72

Query: 87  ACLTLEMLQQVGVDIGALQANGKLVDTDPNACL--DLPALIEHASVRYDVPRLRLLVSVP 144
             LT +ML+  G+   A+     L+    N  L  D+   I  AS R D   + L +S+P
Sbjct: 73  Q-LTPDMLRAWGI---AIDQYPDLLALPTNKALPKDISNYIPQASARLDFSTMTLALSIP 128

Query: 145 QRAMERGRRGYVDPALWDDGVPAAFMNYQLSSNRSS-NDANTTLSNNLGLRNGINLGGWR 203
           Q A+      Y+DP+ WDDGVP  F +Y  S +++  N  N+  S  L LR G NLGGWR
Sbjct: 129 QAALSGTGHDYIDPSRWDDGVPVLFSDYAFSGSKNKDNGDNSATSQYLNLRTGANLGGWR 188

Query: 204 LRNESNFSSSTGRSSTFKSNRSYLQHDLTALKGQFSAGDIFSDADLFDSVRYRGLKMASD 263
           +RN S +S+S   +  +++  ++LQHD+ ALK QF+AG+  +  ++FDS++YRG+ +ASD
Sbjct: 189 VRNYSTWSNSESENQ-WENINTFLQHDVDALKAQFTAGESNTRGEVFDSLQYRGVNLASD 247

Query: 264 DGMRADSERGYAPIIRGVAQSSATVEIRQNNYILYTANVPPGPFEISDIYPSGSNGDLEV 323
           + M   S+RGYAP+IRG+A S+A V +RQN Y++Y  NV PG FEI+D+Y + ++GDL+V
Sbjct: 248 EEMLPYSQRGYAPVIRGIASSNAEVSVRQNGYLIYQQNVAPGAFEINDLYSTTNSGDLDV 307

Query: 324 TVIEADGRRRVTVQAFSSLPIMVREGQVKYSLSAGQYNSNS-DGQKTPQFVSSTLAYGIS 382
           TV EADG      Q +SS+ IM+R G++KY ++AG+Y + S   QK P F   ++ YG++
Sbjct: 308 TVKEADGTEHRFTQPYSSIAIMLRPGRMKYEMTAGRYRAESGSDQKEPNFFQGSMIYGLN 367

Query: 383 SNLSGIVGVQATQDFQALSVGAGRNTS-IGAVSLDMTHSASR-TFGRQVTGNSLRALYAK 440
           + L+   G+  ++D+ A + GAG     +G++S D+T + +R     Q TG S R LY  
Sbjct: 368 NLLTWFGGLTLSKDYNAANTGAGLALGPLGSLSADVTMADTRLDDNSQHTGQSWRLLYTG 427

Query: 441 TFTGTDTNFTLAAYRYSTEGYRTLTEHVEELS--SDGRTHLGNSKTRTDLTVNQSLGRNQ 498
               T+TNF+L +YRYS+ GY +  +  ++     D      N + R   +V+Q++    
Sbjct: 428 KLDSTNTNFSLGSYRYSSRGYYSFADANQKRDGHEDDLLFRYNKRNRIQASVSQTVAG-- 485

Query: 499 QFGSVYLNASDQRYWGRGGAQ-SLSAGYSNYWRDVTYNLSATHTKDVGNYGPSNNDTLIN 557
              S+YLN   Q YWG    + SLS G +      +Y+++ T++K          D +++
Sbjct: 486 --VSLYLNGYQQDYWGTSKKERSLSVGLNTVIAGTSYHIAYTYSKT----NDEEADRMVS 539

Query: 558 LSLSFPLGS-KPRAPRAFVSASTQKDNDTTQMGVNGYLTEDSNTYYSLQAGNSS-TGGST 615
           L  S PL    PRA  ++  ++T+       +G++G L +D    YSLQ  +S+  G   
Sbjct: 540 LGFSIPLARWLPRAWSSYNISNTKNGYTRQNVGLSGTLLDDERLSYSLQQSHSNHDGEDI 599

Query: 616 GSANLSTRTALMDISGGYSQGRGYSAQ-NLNVAGSVVAHAGGINLGQTVGETFALAQVEG 674
            S   S R+   +++ GY      S Q N  ++G +VAH  G+ L Q +G  FA+     
Sbjct: 600 SSVYGSYRSQYANLTAGYYASTDNSQQLNYGISGGIVAHPQGVTLAQPLGSQFAIVNAND 659

Query: 675 VPGVKISSFSGARTGSNGYAVIPNTQPYRVNWISLDTRDLGADIEIDNATQQVVPRRGAV 734
             GV+  +  G +T   G AVIP+  PY+ N I +DT  L  +++  +    V+P R A 
Sbjct: 660 ASGVRFLNQRGIQTDWQGNAVIPSLTPYQENNIRIDTSSLPENVDSSDTAITVIPSRNAA 719

Query: 735 VLARYASKSGRRVQFALFDAQHRPIPFGASLESMAGKQMAIADPGGKALALVEEDTGTLV 794
           VLAR+ + +G R+   L      P+PFGA   S       I D  G        +T  + 
Sbjct: 720 VLARFDAHTGYRMLITLKRPNGLPVPFGAIATSSDPVMSGIVDETGTVYLAGIGETAQVT 779

Query: 795 IKWAD---QHCQA 804
           +KW +   Q C+A
Sbjct: 780 VKWGNGTGQQCRA 792