Pairwise Alignments

Query, 249 a.a., pilus assembly protein from Pseudomonas simiae WCS417

Subject, 259 a.a., Type 1 pili chaperone protein FimC from Pseudomonas putida KT2440

 Score =  139 bits (351), Expect = 4e-38
 Identities = 82/235 (34%), Positives = 132/235 (56%), Gaps = 4/235 (1%)

Query: 4   RYSLSLCAGLLGLFAVGQATAGISLSSTRLVFDGQHKEAGITVRNSGEDIL-IQSWVDTD 62
           R  + +C  LL L     + A ++L++TRLVF+G  +   + VRN  + I  +Q+W++TD
Sbjct: 21  RVVVCVCLTLLMLTLSVNSHAALTLNNTRLVFNGDKRSTSVVVRNPSKSIYAVQAWINTD 80

Query: 63  -DADASSVPFAVTPPLARVTSNEQQLLRVIYEGTGMPTDRESVVWLNVQEIPKASK-TEN 120
            D + +SVPFA +PPL ++  N +QLL++I     +P DRES+ + NVQEIP+ S  T N
Sbjct: 81  ADDNTTSVPFATSPPLFKINPNSEQLLKIIGLPNTLPHDRESLFFFNVQEIPQVSSDTGN 140

Query: 121 TLQLAVRQRIKVFFRPAGMKNNAYLAPTELRWQLAEHGGKPVLRVSNPGAYHVSIADITL 180
            L +A+R RIK+F+RP  +K         L + L+   G   L V NP  +H++   + +
Sbjct: 141 QLNIALRTRIKLFYRPPTLKGTPTDHLNSLTFSLSVRNGVEQLVVKNPSPFHITFNRLEV 200

Query: 181 QAGAVSEHPFDTMMIAPGEQKEFVLKQLPVTNTAHLKFSSINDYGA-QDPYSAQI 234
           +         +T M+ P  +K + L  +   ++   +FS +NDYG   +P SA I
Sbjct: 201 KGQGQQHTLKNTAMLEPFGEKTYPLTGITRASSLQARFSIVNDYGGFTEPLSAPI 255