Pairwise Alignments

Query, 249 a.a., pilus assembly protein from Pseudomonas simiae WCS417

Subject, 228 a.a., long polar fimbrial biogenesis chaperone LpfB from Escherichia coli ECRC99

 Score =  141 bits (356), Expect = 1e-38
 Identities = 80/207 (38%), Positives = 125/207 (60%), Gaps = 15/207 (7%)

Query: 25  GISLSSTRLVFDGQHKEAGITVRNSG--EDILIQSWVDTDDADASSVPFAVTPPLARVTS 82
           G+ LSSTR+++DG  KEA +TV+N    E+ LIQSWVD D A +   PF +TPPL ++  
Sbjct: 22  GVGLSSTRVIYDGSKKEASLTVQNKSKTEEFLIQSWVD-DAAGSKKTPFIITPPLFKLDP 80

Query: 83  NEQQLLRVIYEGTGMPTDRESVVWLNVQEIPKA---SKTENTLQLAVRQRIKVFFRPAGM 139
            +  +LR++    G+P DRESV W+NV+ IP     S+ +N LQ+AVR RIK+F+RPAG+
Sbjct: 81  EKNNILRIVNITPGLPQDRESVYWVNVKAIPSKSDDSENKNVLQIAVRTRIKLFYRPAGL 140

Query: 140 KNNAYLAPTELRWQLAEHGGKPVLRVSNPGAYHVSIADITLQAGAVSEHPFDTMMIAPGE 199
           K +   AP ELR+    +G +  LRV NP     ++ +IT      ++   +   + P +
Sbjct: 141 KGDVKTAPNELRF--TRNGNQ--LRVDNP-----TVFNITFNQFFANDKEIEKAGMVPAK 191

Query: 200 QKEFVLKQLPVTNTAHLKFSSINDYGA 226
               +     V + + +K+++IND+G+
Sbjct: 192 GALNITLPAGVGSVSKIKYNTINDFGS 218